KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382984
Entry
139382984         CDS       T10872                                 
Name
(RefSeq) cell adhesion molecule 1-like isoform X1
  KO
K06781  cell adhesion molecule 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    139382984
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ocla04515]
    139382984
Cell adhesion molecules [BR:ocla04515]
 Immunoglobulin superfamily
  Nectin family
   139382984
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 C2-set_2 V-set C1-set C2-set_3 KOW2_Spt5 Adhes-Ig_like Syndecan
Other DBs
NCBI-GeneID: 139382984
NCBI-ProteinID: XP_070983366
LinkDB
Position
24:21180228..21337332
AA seq 421 aa
MAITGNGSLTISLSVFVISAAFLLKGAAETLSVEGQNLGTDNVSVIEGEMATISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGSPIMDSREDVVSEGNETELTCTAMGSKPAASIRWMKGEQELTGE
MTVDETYDRMFTVTSRLRLTVSKEDDGEPVSCIIDHPAVKDLRAQRYLEVLYQPEVKIVQ
AFPEGLTREGENLELTCIAKGKPQPHQISWLRVDDDVPSHTVITGSDLFIENLNKSYNGT
YRCVASNTVGDAYDDYILFVYDAPTTIPTPTTLNLDNTQDSRADEGAPQKIDHAVIGGVV
AVVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTEEKKEYY
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgatcacgggaaacggatctctcactatttctctctctgttttcgtgatttcagcg
gcgtttcttctaaaaggagccgctgagaccttgtcagttgaaggtcaaaacctggggact
gataatgtgtcagtgatcgagggggagatggcgaccatcagctgcagggtgaagaacaat
gatgactcagtcatccagctccttaaccccaacagacagaccatctacttcagagacgtc
agacccctgaaggacagccggttccagctggtgaatttctccgacaatgaactgcgggtg
tctctgtccaacgtgtctctctcagatgagggacgctatgtgtgccagctctacacagac
cctcctcaggaggcctacgcagacatcactgtgctggtcccaccaggcagtccaatcatg
gattcccgagaggatgtggtcagtgaggggaacgagacagagctcacctgtacagccatg
ggcagcaagcctgccgcctccattagatggatgaaaggagagcaggagctgacaggcgag
atgacggtggatgagacctatgacaggatgttcacggtcaccagtcggctgagactcact
gtgtccaaggaggacgacggagagccagtcagctgcatcatcgaccacccagccgtgaag
gacctccgggcacagagatacctggaagtgctatatcaaccagaagtgaagatcgttcag
gcgttccctgaaggtttaacgagagagggagagaatctagagctgacgtgcatagcaaaa
ggcaaaccacagccccatcagatcagctggctcagagtggatgatgatgtgccatctcac
accgtgatcaccggctctgacctcttcatcgaaaacctcaacaagtcgtacaacggcacg
taccgctgtgttgcctccaacaccgtgggagatgcctacgatgactatatcctctttgta
tacgatgctcctaccacgatccccacacccaccaccttgaacctagacaacacccaagac
tccagagctgatgagggggcgccacagaagatagaccacgctgtcatcggaggtgtggtt
gccgtggtgatgttcgctatcctctgtgcactcatcgtcctggggcgctacttcgccaga
cacaaaggcacctacttcacacatgaagccaaaggggcagacgacgcagcagatgcagac
acggccatcattaatgcagaggggggacacaacaacacggaagagaagaaggagtactac
atctaa

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