Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383020
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Entry
139383020 CDS
T10872
Name
(RefSeq) ras-related protein Rab-4B
KO
K07880
Ras-related protein Rab-4B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139383020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139383020
04031 GTP-binding proteins [BR:
ocla04031
]
139383020
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
139383020
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139383020
GTP-binding proteins [BR:
ocla04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
139383020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
AAA_7
Gtr1_RagA
Septin
ATPase
SRPRB
AAA_22
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
139383020
NCBI-ProteinID:
XP_070983415
LinkDB
All DBs
Position
24:5351090..5365288
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AA seq
213 aa
AA seq
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MSETYDFLFKFLVIGSAGTGKSCLLHQFIETKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCG
NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKTARTILNKMESGELDP
ERMGSGIQYGDSSLRQLRQPRGSAAQIKQQCNC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacatacgacttcctgtttaagttcctggtgattggcagtgctggaacaggg
aaatcttgcctcctgcaccagttcattgagaccaagttcaagcaggactccaaccacacc
atcggggttgagtttggttccagggtggtcaacgtcgggggtaagacggttaaactgcag
atctgggacacagctggacaggagcgcttcaggtctgtgactcgcagctactaccgtgga
gcggcaggggcgctgcttgtctatgacattacaagccgggagacgtacaacgccctgacc
aactggctgacagacgcgcggacgctggccagccccaacatcgtcatcatcctgtgcggg
aataagaaggacctggacgcggaccgagaggtcaccttcctcgaggcgtcccgcttcgca
caggagaacgagctgatgttcctggagaccagtgctctgacaggggagaatgtggaggag
gccttcctcaaaactgcccgcaccatcctcaacaagatggagtcaggtgagttggaccca
gagcggatgggttcaggtatccagtatggagattcttctctgaggcagctgagacagccc
agaggttccgccgcacagatcaagcagcagtgtaactgctag
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