Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383138
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Entry
139383138 CDS
T10872
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139383138
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139383138
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139383138
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
139383138
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (U)
139383138
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139383138
Prokaryotic type
139383138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
139383138
NCBI-ProteinID:
XP_070983594
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All DBs
Position
24:28296341..28306668
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AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFHALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSPASSEPQRLVITEETTAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPPG
DIRFKPLNQAKEYTAQELMSLYKTDSHLRHYLHIIEDEAVYPVIYDSNGIVLSMPPIING
DHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEEAEVVYPDGRTCQY
PELAYRKETLSADFINRKVGISESTEHIAQLLTKMCLRSEVMSDGEQIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTIANQLPLNKLSELLRQDLAAAGFTEALTFALCS
QEDIADKLLKNISETRACRISNPKTAEFQVARTTLLSGLLKTVAANRKMPLPLRLFEISD
VVLKDESKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEIKPGQGNGYHIQAADD
STFFPGRCAEIFACGKSIGRLGVLHPDVINRFELTMPCSALDIDIEHFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtcaaaagggatcttctgtttcatgccttgggcagaacatacact
gatgaagaatttgatgagttgtgttttgagtttgggctggagctcgatgagattacctca
gagaaggacatcatcagtcgtgagcagggggacaccaaggcagagggggcgtctgatgtg
attctgtataagatcgatgtcccagctaaccgctatgaccttctgtgtctggaagggctg
gtcaggggcctgcaggtcttcaagcagaagatggaagcccctcgctacaggcgtgtgagt
ccagccagcagtgagcctcagaggctggtcatcacagaggagacaactgctgtgcgaccc
cacgctgtggctgcagtcctgaggaatatcaccttcacacaggaacgctacgacagcttt
atcgaactacaggagaaactccatcagaatgtctgtaggaaaaggactctggttgccatc
ggcacccatgacctggacaccatttcaggccccttcacctacacagccaaaccacctggt
gacatccgcttcaaacctctcaaccaggccaaggagtacaccgcacaggaactcatgagc
ctctacaagacagacagccacttgcgacactatctgcacatcattgaagacgaggctgta
tatcctgtcatctatgacagcaacggcattgtactgtctatgcctccaatcatcaatggg
gaccattccaaaatctccttgaatacaaagaatgtttttatcgagtgcacagccactgac
cttaccaaggcaaaaattgtgttggacatgatggtgacgatgttctgcgagtattgtgaa
gagcctttcacggtagaggaggctgaggtggtgtacccagatggaaggacctgtcagtac
ccggagctggcttacaggaaggaaactctgtcagccgacttcatcaaccgtaaagttggc
atcagtgagtcgactgagcatatcgctcaactgttgaccaagatgtgcttgcgctcagag
gtcatgagtgacggcgaacagatcgaggtggagatcccgcccacgcgctctgacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcgtacggtttcaacaatattccccgc
accacgccgcgcacatataccatagccaatcagctcccactgaataagctgtcagagcta
ctgagacaggacctggctgctgctggattcacggaggccctcaccttcgccctgtgttct
caggaggacatagctgacaagctgttgaagaacatctcagagaccagagcatgtcgcatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccctgctctcaggcctgctg
aagactgtggctgccaacaggaagatgcctctgcctctgaggctgtttgagatttcagac
gtggtgctcaaggatgaatccaaagacgtgggggccaggaacaaccgtcgcctgtgtgct
gtctactacaacaagagtccggggtttgaggtgatccacggtctgatggacagggttatg
cagctgctggagatcaaaccaggccagggcaatggctaccacatccaggctgccgacgat
tccaccttcttccctggtcgctgtgctgagatctttgcgtgcgggaagagcataggacgc
ctcggggtccttcaccctgatgtcatcaaccgctttgagctcaccatgccatgctccgcc
ctggacatcgacattgagcacttcctgtga
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