KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383205
Entry
139383205         CDS       T10872                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139383205
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139383205
Spliceosome [BR:ocla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    139383205
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     139383205
SSDB
Motif
Pfam: AAA_33 SPRY SAP Roc
Other DBs
NCBI-GeneID: 139383205
NCBI-ProteinID: XP_070983771
LinkDB
Position
24:complement(43230639..43258765)
AA seq 909 aa
MRSAEVKKLKVNELKEELRRRSLDTKGLKADLVERLNAALEAEAAEPGGATRGTPEHEPE
EEQRGDGEEGFGDEGFPNKDPLDIGAGGAPEEESRGMEREESSDSDLGFSMPDFTADVPL
PVPVFKTEETQSEETPEYHETELSLAEQQQRQSERKQEYEGKVEVKKEDEEKKEEEQQRD
QEQPDLQPQPGVGPTHKWEEMKEQKAEQKAEQTKMEEGDRHEGDRQEGDRQEGDRQEGDR
QEGDRQEGDRQEGDRHEGDRQGRKRPHEEDRGYGRYEHRDDKRSRSPQPPAEEEEEDFDD
TLVALDTYNCDLHFKVSRDHYSGYPLTVEGFAYLWAGARASYGVSKGKVCYEMKVLEEIA
VKHLPSSEPDPHVVRIGWSLDSCSTQLGEEAFSFGYGGTGKKSSDCKFEDYGEKFGENDV
IGCFIDFDAGGEEVKIAFSKNGVWLDVGFQASREELAGRPLFPHVLVKNCAIEFNFGQKE
EPFHPPPEGYRFIQTIGIEDRTRGAVGPASKADCEILMMVGLPACGKTTWASKHTESHPE
MKYNTLGTNAIMEKMKVMGLRRQKNYAGRWDVLIQQATQCLNRLIQIAARKRRNYILDQT
NVYGSAQRRKMRPFEGFQRKAIVICPTEEDFKERTLRQTDEQGKDVPDQAVLEMKANFLL
PEPSDFLEEVIFVELQREEAFNLVKEYNEEGRKAGPPPDKRHDNRPGGFRGNGGGYQRYD
DRGGPRGGVGYQSRDAGGYRRGKEGTDSSPGNNRGGYTGNRWGGNGNYREGGSSAPRGGY
NRNQQSGGYNRPAPYSKGGYNQSYNPSSYNQGNYQQGYTYGSYSQYPGYSQTQSYSESTP
AAAGQTYSQQQNYNQQYQQYAQQWQQYYQNQSQWNQYYGQYGNYAGQGQGQPGQGSQGQG
GQGASGSSQ
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgaggagtgctgaggtgaagaaactgaaagtgaacgagctgaaagaggagctgcgtcgg
cgatccctggacaccaaggggctgaaggcggacctggtggagcggctcaatgcggctctg
gaggcggaagctgcggagcccggtggagctacaagggggacaccggagcacgagccggag
gaggagcagcggggagatggagaggagggatttggggatgaaggattcccgaacaaagat
cctctagacattggtgcaggaggagcccctgaggaggagagcagggggatggagagagaa
gagtcgtctgattctgatctgggcttcagcatgcctgacttcactgcagacgtccctctc
cctgtccctgttttcaagacagaggagacacagtccgaggagacccctgagtaccacgag
accgaattatccctggcagagcagcagcagaggcagtctgagaggaagcaagagtatgaa
gggaaggtggaggtgaagaaagaggatgaggagaaaaaggaggaagagcagcaacgtgat
caggagcagccagacctgcagccgcagccaggggtggggccaactcacaaatgggaggag
atgaaggagcagaaggcggagcagaaggcggagcaaaccaagatggaggagggagacaga
cacgagggagacagacaggagggagacagacaggagggagacaggcaggagggagacaga
caggagggagacagacaggagggagacagacaggagggagacaggcacgagggagacaga
cagggacgcaagagaccacatgaagaggaccggggctatggccgctacgagcaccgtgac
gacaagaggtcccgttcgccccagccccctgctgaagaggaggaggaggactttgatgac
actttggtggctctggacacatataactgtgacctccacttcaaggtgtcccgtgatcat
tacagcggctaccctctgaccgtcgagggctttgcctacctctgggccggagctagagca
tcctacggagtcagcaagggcaaagtctgctacgagatgaaggtcttagaggagatagct
gtgaagcacctcccgtcctctgagcctgatccccatgtggtccggataggatggtccctg
gactcctgcagcacacagctgggtgaggaagcgttttcgtttggatacggaggaacaggg
aaaaaatcctctgactgtaagtttgaagactacggagagaagtttggagagaatgatgtc
atcggctgtttcattgactttgacgctggcggtgaggaggtgaagatagcgttctctaag
aatggggtgtggctagacgtggggttccaggcgtcgagggaggagctggcggggcgcccc
ctgttcccccacgtccttgtgaagaactgtgccatcgagtttaacttcggccagaaggag
gaacccttccacccccctccggaggggtacaggttcatccagactattggtattgaagac
aggaccaggggggctgtaggaccagccagcaaggctgactgtgagatcctcatgatggtg
ggtctgccagcctgtggcaagaccacctgggcctcaaaacatactgagagtcacccggag
atgaaatacaacaccctgggaaccaacgccatcatggagaagatgaaggtgatgggtctg
cgtcgtcagaagaactacgccggtcgttgggacgttctgatccaacaggccactcagtgt
ctcaaccgcctcatccagatcgccgcacgcaagagacgcaactacatcctggaccagaca
aatgtttatggatcagcccagagacgaaaaatgcgcccttttgaggggtttcagcgcaag
gctattgtaatatgtcccacggaggaggactttaaagagcgaacgttaagacaaactgat
gaacaggggaaggatgtgccagatcaggctgtgttagaaatgaaagccaacttcctgctc
cctgagcccagcgacttcctggaagaggtgatttttgtggagctgcagcgggaagaggct
ttcaatctggtgaaggaatacaacgaggagggacgcaaggccggcccaccccccgacaaa
cgccatgacaaccgtccgggagggttccgtggcaacggcggaggctaccagcgctatgac
gaccgtggcggtcctcgcggcggcgtaggataccagagtagagacgcaggcggatacaga
aggggtaaggaaggaacagactcctccccaggcaacaaccgtggcggctacaccggcaac
cgctggggtgggaacggtaactaccgtgagggggggtcgtcggctccgaggggagggtac
aaccgtaaccaacagtcaggaggctacaaccgcccggcgccctacagcaaagggggatac
aaccagagttacaaccccagcagctacaatcaaggcaactaccaacagggttacacctac
gggagctacagtcagtacccaggatacagccaaactcagagttacagcgagtctacgcca
gctgccgcaggacagacctacagccaacagcagaactacaaccagcagtaccagcagtat
gcccagcagtggcagcagtactaccagaaccagtctcagtggaaccagtactatggccag
tatgggaactatgccggccaggggcagggtcaaccaggtcagggttcacaggggcaggga
ggtcagggggcatcaggttcctcccagtaa

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