Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383205
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Entry
139383205 CDS
T10872
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139383205
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139383205
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
139383205
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139383205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
Roc
Motif
Other DBs
NCBI-GeneID:
139383205
NCBI-ProteinID:
XP_070983771
LinkDB
All DBs
Position
24:complement(43230639..43258765)
Genome browser
AA seq
909 aa
AA seq
DB search
MRSAEVKKLKVNELKEELRRRSLDTKGLKADLVERLNAALEAEAAEPGGATRGTPEHEPE
EEQRGDGEEGFGDEGFPNKDPLDIGAGGAPEEESRGMEREESSDSDLGFSMPDFTADVPL
PVPVFKTEETQSEETPEYHETELSLAEQQQRQSERKQEYEGKVEVKKEDEEKKEEEQQRD
QEQPDLQPQPGVGPTHKWEEMKEQKAEQKAEQTKMEEGDRHEGDRQEGDRQEGDRQEGDR
QEGDRQEGDRQEGDRHEGDRQGRKRPHEEDRGYGRYEHRDDKRSRSPQPPAEEEEEDFDD
TLVALDTYNCDLHFKVSRDHYSGYPLTVEGFAYLWAGARASYGVSKGKVCYEMKVLEEIA
VKHLPSSEPDPHVVRIGWSLDSCSTQLGEEAFSFGYGGTGKKSSDCKFEDYGEKFGENDV
IGCFIDFDAGGEEVKIAFSKNGVWLDVGFQASREELAGRPLFPHVLVKNCAIEFNFGQKE
EPFHPPPEGYRFIQTIGIEDRTRGAVGPASKADCEILMMVGLPACGKTTWASKHTESHPE
MKYNTLGTNAIMEKMKVMGLRRQKNYAGRWDVLIQQATQCLNRLIQIAARKRRNYILDQT
NVYGSAQRRKMRPFEGFQRKAIVICPTEEDFKERTLRQTDEQGKDVPDQAVLEMKANFLL
PEPSDFLEEVIFVELQREEAFNLVKEYNEEGRKAGPPPDKRHDNRPGGFRGNGGGYQRYD
DRGGPRGGVGYQSRDAGGYRRGKEGTDSSPGNNRGGYTGNRWGGNGNYREGGSSAPRGGY
NRNQQSGGYNRPAPYSKGGYNQSYNPSSYNQGNYQQGYTYGSYSQYPGYSQTQSYSESTP
AAAGQTYSQQQNYNQQYQQYAQQWQQYYQNQSQWNQYYGQYGNYAGQGQGQPGQGSQGQG
GQGASGSSQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgctgaggtgaagaaactgaaagtgaacgagctgaaagaggagctgcgtcgg
cgatccctggacaccaaggggctgaaggcggacctggtggagcggctcaatgcggctctg
gaggcggaagctgcggagcccggtggagctacaagggggacaccggagcacgagccggag
gaggagcagcggggagatggagaggagggatttggggatgaaggattcccgaacaaagat
cctctagacattggtgcaggaggagcccctgaggaggagagcagggggatggagagagaa
gagtcgtctgattctgatctgggcttcagcatgcctgacttcactgcagacgtccctctc
cctgtccctgttttcaagacagaggagacacagtccgaggagacccctgagtaccacgag
accgaattatccctggcagagcagcagcagaggcagtctgagaggaagcaagagtatgaa
gggaaggtggaggtgaagaaagaggatgaggagaaaaaggaggaagagcagcaacgtgat
caggagcagccagacctgcagccgcagccaggggtggggccaactcacaaatgggaggag
atgaaggagcagaaggcggagcagaaggcggagcaaaccaagatggaggagggagacaga
cacgagggagacagacaggagggagacagacaggagggagacaggcaggagggagacaga
caggagggagacagacaggagggagacagacaggagggagacaggcacgagggagacaga
cagggacgcaagagaccacatgaagaggaccggggctatggccgctacgagcaccgtgac
gacaagaggtcccgttcgccccagccccctgctgaagaggaggaggaggactttgatgac
actttggtggctctggacacatataactgtgacctccacttcaaggtgtcccgtgatcat
tacagcggctaccctctgaccgtcgagggctttgcctacctctgggccggagctagagca
tcctacggagtcagcaagggcaaagtctgctacgagatgaaggtcttagaggagatagct
gtgaagcacctcccgtcctctgagcctgatccccatgtggtccggataggatggtccctg
gactcctgcagcacacagctgggtgaggaagcgttttcgtttggatacggaggaacaggg
aaaaaatcctctgactgtaagtttgaagactacggagagaagtttggagagaatgatgtc
atcggctgtttcattgactttgacgctggcggtgaggaggtgaagatagcgttctctaag
aatggggtgtggctagacgtggggttccaggcgtcgagggaggagctggcggggcgcccc
ctgttcccccacgtccttgtgaagaactgtgccatcgagtttaacttcggccagaaggag
gaacccttccacccccctccggaggggtacaggttcatccagactattggtattgaagac
aggaccaggggggctgtaggaccagccagcaaggctgactgtgagatcctcatgatggtg
ggtctgccagcctgtggcaagaccacctgggcctcaaaacatactgagagtcacccggag
atgaaatacaacaccctgggaaccaacgccatcatggagaagatgaaggtgatgggtctg
cgtcgtcagaagaactacgccggtcgttgggacgttctgatccaacaggccactcagtgt
ctcaaccgcctcatccagatcgccgcacgcaagagacgcaactacatcctggaccagaca
aatgtttatggatcagcccagagacgaaaaatgcgcccttttgaggggtttcagcgcaag
gctattgtaatatgtcccacggaggaggactttaaagagcgaacgttaagacaaactgat
gaacaggggaaggatgtgccagatcaggctgtgttagaaatgaaagccaacttcctgctc
cctgagcccagcgacttcctggaagaggtgatttttgtggagctgcagcgggaagaggct
ttcaatctggtgaaggaatacaacgaggagggacgcaaggccggcccaccccccgacaaa
cgccatgacaaccgtccgggagggttccgtggcaacggcggaggctaccagcgctatgac
gaccgtggcggtcctcgcggcggcgtaggataccagagtagagacgcaggcggatacaga
aggggtaaggaaggaacagactcctccccaggcaacaaccgtggcggctacaccggcaac
cgctggggtgggaacggtaactaccgtgagggggggtcgtcggctccgaggggagggtac
aaccgtaaccaacagtcaggaggctacaaccgcccggcgccctacagcaaagggggatac
aaccagagttacaaccccagcagctacaatcaaggcaactaccaacagggttacacctac
gggagctacagtcagtacccaggatacagccaaactcagagttacagcgagtctacgcca
gctgccgcaggacagacctacagccaacagcagaactacaaccagcagtaccagcagtat
gcccagcagtggcagcagtactaccagaaccagtctcagtggaaccagtactatggccag
tatgggaactatgccggccaggggcagggtcaaccaggtcagggttcacaggggcaggga
ggtcagggggcatcaggttcctcccagtaa
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integrated database retrieval system