KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383256
Entry
139383256         CDS       T10872                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20-like
  KO
K24741  WD repeat-containing protein 20
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ocla04990]
    139383256
Domain-containing proteins not elsewhere classified [BR:ocla04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   139383256
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st PD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Ge1_WD40 eIF2A Beta-prop_EML
Other DBs
NCBI-GeneID: 139383256
NCBI-ProteinID: XP_070983806
LinkDB
Position
25:66020..75302
AA seq 342 aa
MAAEGGGKEINEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVTHSSGNMYLYNME
HTCGTTAPHYLLLKQGENYSVHTCKSKSTRNPLLKWTVGEGALNEFSFSPDGKFLACVSQ
DGFLRVFNFDAVELHGTMKSYFGGLLCXCWSPDGKYIVTGGEDDLVTVWSFVDCRFIARG
HGHKSWVSVVAFDHYTTSVEDADPKLSFSQFLTFNPSKKSLS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggcggcggagggaggagggaaggagattaacgaaattaaaactcaattcactacacgg
gaaggcgtctataaactcctcactcattccgaatatagccgccccaatagggtgcctttc
aattcccagggttcgaaccctgtcaaagtttcatttgtcaacgtcaatgaccagtctggc
aacggcgaccgaatatgtttcaatgtgggccgggagctgtacttctacatctacaaaggc
gttagaaaggctgctgatctgagcaaacctatcgacaagaggatatacaaaggaacacag
cccacatgtcacgacttcaaccacctcacggccacggcggagagcgtctccctgttggtg
ggcttctcggctggccaagtgcagctcatcgacccaatcaagaaggagaccagcaagctc
ttcaatgaggaaagactaatagacaaatccagagtaacttgtgtaaaatgggtgccaggc
tcggagagtctgttcctagtcactcattccagtggaaacatgtacttgtacaacatggag
cacacgtgtggcaccacggcacctcactacctgttgctcaaacagggtgagaactactca
gtgcacacttgtaagagcaagtccacgcgcaaccccttgctcaaatggacggtgggcgag
ggagcccttaacgagttttctttctcacctgacgggaagttcctggcgtgtgtgagccag
gacggcttccttcgggtcttcaactttgatgcggtggagctgcacgggaccatgaaaagc
tactttgggggtctgctgtgtnngtgctggagtccagacggaaagtacattgtcacgggg
ggcgaggatgatctggtgaccgtgtggtcgtttgtggactgccgatttattgcacgcggt
cacggacacaagtcgtgggtgagtgtggtggcgtttgaccattacacaactagtgtggag
gatgcggaccctaaactcagtttttcacaattcctgacatttaatcctagtaaaaagtcc
ctgtcttag

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