Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383263
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Entry
139383263 CDS
T10872
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other basic domains
RF-X
139383263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139383263
NCBI-ProteinID:
XP_070983814
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Position
2:93611466..93629864
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AA seq
1621 aa
AA seq
DB search
MSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDSLAYHPLSAADFGKIMKNV
FPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLDLQKSGVGCEPMEPSSGQSPSAED
EMRSAACGLVCEWAQKVLSRQFDAVEDLARFLLNSHYIGTKSMAALTVMTGAPTGLKTPT
PTSAFVPTSEASSFQPQVKTLASPSVDAKQQLQRKIQKKQQEQKLQSPLPGEAQGQNQAR
RTEASNPGPAIPCGSPALLSPQPTIGIVVAAVPSPITVQRSRQLMTSPSPVGSAEGKVIP
TVNFQVVTHTQSLTHRQSPKTPQNISASPVGDRLARHRYPQILPKPSATGAITLRSPPTL
LITNSPMKTHHVIQPQLSSHVNVVKMTAISLTPSNTNSTSCKSMVLRPASASAGVGTTTT
FTTIAALEEVQQQGQSQGRPTATPQCPAVRPGAPVSTVAPEAIITDNNPGVNSDKLSTIQ
KSPGGSNRPERATKYRASSEPSLLVICSPGPERVAARSKSYPSSSSPPTSATNAATIRVE
TKQDSNNNSSTANCHQESPFYLTVVPSANRNTPSISGKSSSSNGLSAVSLLSARDSSSCA
SRSMSPQKRTGPGLDSSHVIPVKRVFISQQPLGVTFDPKSVVTAAVKRVPARQSTPARPE
SAPCRVTVKQRLVPTQILAPSDSPVANAEISSFSSQTVSVKPQSSLLLLVKQEDQSSLTL
RLSTVSSHTSSTEASGTTTTAVSEQQQQQQQQQKQQQQQQQQQQQALLQQITAGTVGAQQ
HSVSVMAVEAQQHSVSVMAVGAQQHSVSVMAVGAQQHSVSVMAVEAQQHSVSAMGSMKST
MLEESAAGYVEELQKQAFTQTIAADHTKQQALGSTDKHQLSNIMSQTSDSSDQLSGLYQE
MVDFASSASQHGSTMDYFSFNDDDMTQDSIVEELVQMEEQMKLKGLQPLFSSCVDNISLQ
GQPGGPQGPILNTHHQEDSSSFYQSAHSSITPIQTPTLTPTPTPTEMTLGGDELTRESPC
CHHSMAPITPLGGRHTPISALSNCSSGIPASPVECRNPFAFTPINSSMAGGYHNASVVSV
SSSPIKPMQRPMATHPDKAKLEWINNRYNSSGTEATGGVGAGSGSGLSISNHSLGGLLPS
YQDLVDDHFRKPHAFAVPGHSGQSFQAQSRQRDGSHFGHLTPISPAQQQLTSVSTTPTNT
AIKQDESFAVPAPLDSKGGALSSGGGAFRCRSVSPAVSQMTFSGTDTTIGTDTTPDTGTT
TRLVVSQFSSPMTSQEILIILSNSQSVGGNLHSMAQRSQSVPLNIMMQSVVEMQGIQGQN
QSNATKITNVLLSKMDSDVNDTVRGLGINNLPSNYTARMNLTQMLETQSQSQTAPGGFTT
GGDGGGGGNAHQSQLQTVISSPASFELQQHGGYSTSTGGGGGEMSFNQAQSGPGGEDVDL
ELQQIQELQEASGQLHLQLLQTQARVLLSPHPQLQSPQAGFQLLQPITTQQQQQQQDEED
KAQQQLDFNSTVKDLLGDDGLNVSSQLVGQVTSELNAAVASDFTDDIRLTSDLSSSITDL
NTLDADLLFDPSNQQQEQYEDATLEELKNDPLFQQICSDTVNSSFDWLECKDQPTTVEML
G
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagccgaacacagcagatgtacgctttcaactggatccgcaatcacctagag
gagcaccctgagacatcactgccaaagcaagaggtgtacgacgagtacaagagctactgt
gacagtcttgcctaccacccactgagtgctgcagactttggaaagatcatgaagaacgtg
tttcccaacatgaaggctcgccgcctgggcatgagaggcaaatctaaatactgttatagt
ggactgaggaagaaagcttttgttcacatgccttctctgcccaacctggacttacaaaaa
tcaggcgtcgggtgtgagccgatggagccgtcgtcgggccagtctcccagtgcggaggat
gagatgcgctcagcggcctgtggcttggtgtgtgagtgggctcagaaggtcctcagcaga
cagtttgatgccgtggaggacctggctcgcttcctgctcaacagtcactacataggaacc
aagtccatggctgccctcaccgtcatgactggggctcccacaggtctgaagactcccacg
ccaacctctgcgttcgtgcccacgtccgaggcctcttccttccagccgcaggtgaagacg
ctggcctctccctcggtggacgccaagcagcagctccagaggaagatccagaagaaacag
caggagcagaagctccagtcccccctgcctggagaggcccagggacagaaccaggccagg
aggaccgaggccagcaacccagggccagctatcccctgtggaagtcctgctttgctttca
ccacaacctaccattggtattgtggtggcagccgtccccagccccatcacggtccagagg
agcaggcagctgatgacatcccctagcccggtggggtccgccgaggggaaggtcatacca
acggttaacttccaggtggtcacccacacccagtctctgacccacagacagtcccctaaa
acgccccagaacatctcagccagccccgtgggagaccgcctggctaggcacaggtacccc
cagatcctccccaagccctctgccacgggggccatcaccctgcgttcgccccccaccctg
ctcatcaccaacagccccatgaaaacccaccacgtgatccagccccagctcagctcccac
gtcaacgtggtcaagatgaccgccatctccctgaccccgagcaacactaacagtaccagc
tgtaaaagtatggtcctcaggccagcttcagcctcggccggggtgggaaccaccaccacc
tttaccaccatcgctgccctagaggaggtccagcaacagggacagagccagggacgcccc
acagccaccccacaatgccctgcagtacggcctggcgccccagtctccacagtggctcct
gaggccatcatcactgacaataacccgggcgttaactctgataaactgagcaccatacag
aagtcccccggtgggtccaatcgtccagagagggccactaagtaccgagcgtccagcgaa
ccctcgctcctggtcatatgctccccaggacctgaaagagttgccgccaggagcaaaagc
tacccttcctctagctcccctcccacctctgccaccaatgcagcgactattagggtagag
accaagcaggacagcaataacaacagcagcaccgccaactgtcaccaagaaagtcctttt
tatctgactgttgtaccctcggccaatcggaacactcctagcatcagcggaaagtcctcc
tcgtccaatggcttatcggctgttagcctattgtctgctagagactcctcctcctgtgcg
tcacgttctatgagtccccagaagcgaaccggccctggtctggactcctcccacgtgatc
cctgtgaagcgtgtcttcatctcccagcaacctttaggtgtgacctttgaccccaaatca
gtggttaccgccgctgtcaagagggtcccagccagacaaagcacgccggcccgaccggag
agcgccccctgtcgagtgacggtgaaacaacgcctagtgcccacgcagatcctggcgccg
tctgactcgcccgtcgcgaacgcagagatctcctccttctcctctcagactgtcagtgtg
aagccccagtcctccttgttgctgctagttaaacaggaagaccagtcctctctaactcta
cgtctcagcactgtcagcagtcacaccagcagcactgaagcctctggtacaaccaccacc
gcggtgtctgagcagcagcaacaacagcaacaacagcagaaacaacaacagcaacaacag
caacaacagcaacaggccttactacagcagatcacagcagggacagtaggagcacagcaa
cactctgtctctgtgatggcagtagaagcacagcaacactctgtctctgtgatggcagta
ggagcacagcaacactctgtctctgtgatggcagtaggagcacagcaacactctgtctct
gtgatggcagtagaagcacaacaacactctgtctctgcgatggggagcatgaaaagcaca
atgttggaagagtcagccgcaggatatgtggaggagctgcagaaacaggccttcactcag
accatcgcagcagaccacaccaagcagcaggccctgggttctaccgacaaacaccaactc
tccaacatcatgtcccagacctcagactcctctgatcagttatctggtctttaccaggag
atggtggactttgcctcctcagcctcccagcacggctccaccatggactacttctccttt
aatgatgacgatatgacccaggacagcatagtggaggaactggttcagatggaagaacag
atgaagctgaagggcctccagccgttgttcagtagctgtgtggataatatctctctccag
ggccagcctgggggcccccaggggcccatcctcaacactcaccaccaggaggatagttcc
tctttctaccagtctgcccatagcagcattacccccatccagacccctaccctgactcca
acccctacccccacggagatgactctcggtggggacgagctgaccagagagagcccctgt
tgccatcacagcatggcccctatcacgcctctaggaggccgacacacccctataagcgct
ctgtctaactgttctagcggcatccctgccagcccggtggagtgcaggaacccgtttgcc
ttcacccctatcaactccagcatggcagggggttaccacaatgcctctgtggtgtctgtc
tcctccagtcccatcaagcccatgcagagacccatggccacgcaccctgataaggctaaa
ctcgagtggatcaacaaccgctacaacagtagtggtactgaagctactggaggagtcgga
gcaggttccgggtccgggttatccatctctaaccacagccttggtggactcctgcctagt
taccaggatctagtggatgaccattttcgtaagccacatgccttcgctgtcccgggccac
agtggccagtctttccaggcccagtccagacagcgggacggcagccattttggacatctc
acccccatctctccggcgcaacagcagttgaccagcgtatcgaccacacccaccaacacg
gcaatcaaacaggacgagagcttcgctgtgcccgcccctttggacagcaagggtggagcc
ttgtcatcagggggcggggcgttccgttgccgcagcgtcagccccgccgtgagtcagatg
accttcagcggtaccgacacaaccattggtaccgacacaacccccgacactggcactacc
actcgattggttgtctcgcagtttagttcccccatgacctcacaggaaatactcataatt
ctgtccaacagccaatcggtgggcggcaacctccacagcatggcccagcgcagccaatcg
gtgcccttaaacatcatgatgcagagcgttgtggagatgcagggcatccaggggcaaaac
cagagtaatgccactaagatcaccaacgtcctcctgagtaagatggactctgacgtgaac
gacactgtgaggggcctgggcatcaacaacctcccttccaactataccgcccgcatgaac
ctcacccagatgctggagacccagtctcagagtcagactgcccctgggggcttcaccact
ggaggagatggaggaggaggggggaacgcccaccagtctcagctgcagactgtcatctca
agccctgcctctttcgagctccagcagcacgggggttattccaccagtaccggaggaggc
ggtggggagatgagcttcaaccaagcacaatcaggccctggtggtgaggatgtggacctg
gagctacagcagatccaggagcttcaggaggcctcaggacagctccatctccagctacta
caaacccaggctagggtgctcctgagtccccatccccagctccagagtccccaggccggg
ttccaactcctccagcccatcaccacccagcaacagcaacaacaacaggatgaagaagac
aaggcacaacaacagctagacttcaacagcactgtcaaagacctgttaggtgacgacggc
ctcaacgttagctctcagctggttggtcaggtgacctcggaactcaacgccgctgtggcg
tccgacttcaccgacgacatcaggctgacctccgacctctccagtagcatcacagacctg
aacacattggacgccgacctcctgttcgatccgtccaatcagcagcaagaacagtacgaa
gacgccacactggaagagctgaagaacgatcctctgtttcagcagatatgtagtgatact
gtgaactcctcgttcgactggctggagtgcaaagaccagcctactaccgtagagatgttg
ggctaa
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integrated database retrieval system
