Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383313
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Entry
139383313 CDS
T10872
Name
(RefSeq) 5'-3' exonuclease PLD4-like isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00564
Glycerophospholipid metabolism
ocla00565
Ether lipid metabolism
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
139383313
00565 Ether lipid metabolism
139383313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139383313
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
139383313
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
139383313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
P116
Motif
Other DBs
NCBI-GeneID:
139383313
NCBI-ProteinID:
XP_070983895
LinkDB
All DBs
Position
25:complement(17303311..17309008)
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AA seq
519 aa
AA seq
DB search
MLFKCMFKIILMINYILGLNFNRMPGTLVPEMSSPYKTLHDSYVPNRRGSKRLVSIAVVV
GCLTALGALLSFSILDKCTEEEHFQNDKLFQETRTDQNNISDEQSRIILVESIPLYMKYD
DNATFGTPVDKAWRDLLSMATNQVDVASFYWTLTGDDINMNSSTDLPGKDILEQLGALPS
RNVSVRVVTSIPSMLTNSTDLQVLRQKGVQVRKVHFGRLTGGVLHSKFWIVDRRHIFLGS
ANMDWRALTQVKELGVVIYNCSSLAEDLQKIFESYWVMGHFNSSIPDPWPSKYDTAINKE
HPLLLKADNVSSKIYITGSPPSFCPTSRTQDLNAILSVISGAQHFIDVAVMEYFPTTRFI
HPQRYWPAIDDALKRAAFERNVKVRLLVSCGRDSDPAMLPFLQSLASLNYPAHNISIQVK
LSIVPVGNQSEIPYSRVNHNKYMVTDRVAYIGTSNWSADYFNTTAGVGLVVSQHTPNWPW
GTQALQGQLRAVFDRDWHSQFTVCFADLGHHPDCALSKG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttaaatgtatgtttaaaattatattgatgatcaattacattttaggtctgaat
ttcaacaggatgccaggaacattagtgccagagatgtcctctccttacaagactttacat
gatagctatgttcccaaccgaaggggctcaaaacggcttgtgtctatagctgtggttgtg
ggatgtttgactgctttgggtgcactgctctccttttctatattggacaagtgcacagaa
gaagagcatttccaaaatgacaagctcttccaagaaacaagaacagatcaaaataacatt
tctgatgagcaaagccgaattatccttgtagagagcattcccctgtatatgaaatatgac
gacaatgcaacctttgggaccccagtggacaaggcctggagagatctcctgtccatggca
actaaccaagtcgatgtggcttccttctactggactcttaccggtgatgacatcaatatg
aactcttccactgacttacctggaaaggacatactggagcagcttggagctttgccttcc
agaaacgtatcagtgagggttgtgacgagtattccctctatgctgacaaactccacagat
ctacaagttctgagacagaaaggagtccaagtaagaaaggtgcactttgggcgtttgact
gggggtgtactccacagcaagttctggattgttgataggagacacatattccttggaagt
gccaacatggattggagggctcttacacaggttaaggaactgggagtggtgatctacaac
tgctccagtctggctgaagacctccaaaagatatttgagtcctactgggtgatgggtcat
ttcaacagctccatcccagacccttggccctccaaatatgacactgccatcaacaaagag
catcccttgctgctgaaggctgataatgtttcaagcaaaatctacattacaggttctcct
ccctctttctgcccaacatctcggactcaggacctgaatgccatcctctcagtgatatca
ggggcgcagcacttcattgatgtggcagtcatggagtattttcccaccacacgcttcata
caccctcaaaggtactggccggccattgatgatgcattaaagagagctgcttttgagcgg
aatgttaaggtccgtctgctggtcagctgtggacgtgattctgatccagccatgctacct
ttccttcagtctctagcctccctgaattaccctgcccataacatcagcattcaagtgaaa
ctgtccattgtgccagtagggaaccagtcagagattccctactccagagtaaaccataat
aaatacatggtgactgatagagtggcatatattgggacgtctaactggtctgctgactac
ttcaacaccacagctggagtggggctggtggtttcccaacacacaccaaactggccctgg
gggacccaggctctgcaggggcagctcagagcagtgtttgacagggactggcactctcag
tttactgtatgttttgctgacttgggccatcaccctgattgtgcactctcaaaaggatag
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