Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383330
Help
Entry
139383330 CDS
T10872
Name
(RefSeq) calcium and integrin-binding family member 2-like
KO
K23837
calcium and integrin-binding protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
139383330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139383330
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139383330
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
USH complex and associated proteins
139383330
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
EF-hand domain-containing proteins
Calcium binding proteins
139383330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
DUF371
EF-hand_FSTL1
Motif
Other DBs
NCBI-GeneID:
139383330
NCBI-ProteinID:
XP_070983930
LinkDB
All DBs
Position
2:96311765..96359697
Genome browser
AA seq
187 aa
AA seq
DB search
MGNKQTIFTDEQLDAYQDCTFFTRKEILRLHGRYHELAPHLVPMDYTNEPDVTIPLALIV
SMPELNENPFRNRIVESFSEDGAGNLSFNDFVDMFSVLSETAPRELKAIYAFKIYDFNVD
NFLCKEDLEKTLNKLTREELSPEEVTLVCEKAIEEADLDGDSKLSFADFENMITRAPDFL
STFHIRI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgggtaataagcaaacgatatttactgatgaacagctagatgcttaccaggactgtacc
ttcttcacacggaaagagatcctccggttacatgggcgataccatgagctggctccacac
ctagtacccatggactacaccaatgagcctgatgttacaatacccttagctcttatagtc
agcatgccggaactaaatgagaacccgttcaggaacaggatcgtggagtccttctctgag
gacggagcggggaacctgagcttcaacgactttgtggatatgttctctgtcctcagtgag
acagcccccagggagctcaaggccatatacgccttcaaaatatacgatttcaatgtggat
aacttcctgtgtaaggaggatctggagaagactttgaacaagctgacgagggaggagttg
agccctgaagaggtcaccctggtctgtgagaaggccatcgaagaggctgacctagacgga
gatagcaaactgtccttcgctgactttgaaaacatgatcaccagggctcctgacttttta
agtaccttccacataagaatctga
DBGET
integrated database retrieval system