Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383345
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Entry
139383345 CDS
T10872
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139383345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139383345
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
139383345
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Fimbrillin_C
BUD22
Cwf_Cwc_15
PPP4R2
Nop14
Motif
Other DBs
NCBI-GeneID:
139383345
NCBI-ProteinID:
XP_070983955
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All DBs
Position
2:96773525..96838274
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AA seq
726 aa
AA seq
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MYCTQRKRLQLSRVIFLLSVVLLCCLYQLSITSKLSPGPWPHALPQIGEGSGDGEGLTGA
LLEEVALETLREGGHSVDTQEEEIIDLVTTEVSDYYSETTTDDVTPSTTTEVSSSSSSSS
LTTIRSIVHCIYVDLEPPIQIPTLPNPPPTHLVPNTTQSSPADPGDAPHQKGEYPTDIFS
VEDRRRGWVSLHIFGMMYMFVSLAIVCDEFFVPALGVITDQLAISDDVAGATFMAAGGSA
PELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFRDVSFYI
IGNNILSHSKDLIMLIIFFLDNTIMWYESIMLVAGYSSYVCFMKYNVQLEAAFKNQLRKH
QHIINIITVAVEDEPDKDETAGQNSSPPAPEDKKLLKLKPVLQRGGSSASLHNSTMRNTM
YKLMIHTLDPLGNNKEPAVPAPSAAPVPAPAPAPTKEEETKKEQPEGQMEDKSAAVGSSC
SEDDEDDDDSDEDSSDEESSDEESSDEDDDEEDEEDDDLDDKPLSLVWPDTRCKQATYLF
LLPIVFPLWLTVPDVRNPIYKRFFVITFLGSILWIAVFSYLMVWWAHQVGETIGISEEIM
GLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLLWSSFHGFAP
VPVSSNGLFCAIVLLFLMLLFVIISIAVCKWRMNKMLGSTMFLLYFVFLVLSVLLEDRVI
ICPVSI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtacccaaaggaagagactgcagctgagccgagtcatattcctcctgtctgtt
gttctactgtgttgtctctaccagctgtctatcacctccaagctctccccaggaccctgg
ccccatgccctgccccaaataggtgaggggtctggggatggagagggactgacaggggcc
ctcctggaggaggttgcattggagaccttaagggaggggggacacagtgttgacacacaa
gaggaggaaattatagatttggtgacaactgaagtgtccgattattactctgagacgact
acagatgatgtcacaccatccactaccactgaggtctcatcatcatcatcatcatcatca
ttgactacaatccggagtatcgttcactgtatatatgtagacctggagcctcccattcag
atccccacccttcccaacccaccacccacccatctagtccccaacaccacccaatcctcc
cctgccgacccgggggacgcccctcatcagaaaggagagtacccgactgatatcttctct
gtggaggaccggagacgaggctgggtgtcgctccacatcttcgggatgatgtacatgttc
gtctcactcgccattgtgtgtgacgaattttttgtccctgcgctcggcgtcatcacagac
cagctggccatctccgacgacgtggccggggcaaccttcatggcggcaggaggctccgct
ccggagctgttcacctcgctgattggcgtgttcatctctcatagcaatgtgggcatcggg
acgatcgtggggtcggcggtgttcaatatcctgttcgtcatcggcatgtgtgccatcttc
tccagggagatgctgcacctcacctggtggcccctgttcagggacgtctccttctatatc
ataggtaataatatactatcacatagcaaagacctgatcatgttgataatcttcttcctg
gacaacaccatcatgtggtatgagagtataatgctggtggctggctacagctcctatgtc
tgcttcatgaagtacaacgttcagctggaggcagcattcaagaaccagctcaggaaacac
cagcacatcattaatatcatcactgtggctgttgaggatgaacctgataaggatgagaca
gcaggtcagaatagtagccctcctgccccagaagacaagaaactattaaagttgaagcct
gtcctccagagaggaggaagttcagcctctcttcacaactccaccatgaggaacaccatg
tacaagctgatgattcacacactagaccccctgggaaacaacaaagaaccagctgtccct
gcaccctcagccgccccagttccagcccctgctccagccccaaccaaggaggaggagacg
aagaaggagcagccagagggtcagatggaggacaaatcggcagcagttggttcgtcttgt
agtgaggatgatgaggatgatgacgacagtgatgaagatagttctgatgaggaaagttct
gatgaggaaagttctgatgaagatgacgatgaggaagatgaggaagatgatgaccttgat
gacaagcctctgtctttggtgtggccggacaccagatgtaaacaggccacctatctgttc
ctcctgcctatagtcttccctctgtggctcaccgtgcccgacgtccgtaacccgatatat
aagaggttttttgtgatcaccttcctggggtctatcctatggatcgccgtcttctcctac
ctcatggtgtggtgggcacatcaggtgggagagaccataggcatctcagaggagatcatg
ggcctaaccatcctggctgcaggaacgtccatccctgacctcatcactagtgttattgtg
gcccgtaaaggactgggggatatggctgtgtccagttctgtgggctccaacatcttcgac
atcaccatgggcctgccagtcccgtggttattgtggtcgtcgttccatggttttgctccg
gtgcccgtcagctccaacggcctgttctgtgccattgtgttgctcttcctcatgctcctc
ttcgtcatcatcagtattgctgtgtgtaagtggaggatgaacaagatgctgggatctacc
atgttccttctctattttgtcttcctggtgctgagtgttctgctagaggacagagttatc
atctgtcctgtgtccatctga
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