Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383362
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Entry
139383362 CDS
T10872
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139383362
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
EGF_TEN
hEGF
EGF_2
DSL
JAG1
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
139383362
NCBI-ProteinID:
XP_070983974
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All DBs
Position
25:complement(22666974..22699350)
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AA seq
1300 aa
AA seq
DB search
MWNCMGISKCLSIVCLLLVWTEVSQSSGSFELQLIAVQNANGQLSDGDCCDGERNAQDLH
CSRDECDTYFRVCLKEYQTEVTTTGLCIYGTGSTNVIGGNTFQFKSTKNNQNRINDGGKI
VIPFQFAWPRAYTLIVEAWDWDNGTHSSSGTMQLHTKQLLSSTRGIKVPNTKPRLQMIEM
DCQVELPYTNHSKQIHTTTTVARKSEDLLIERSVRKGMINPGDDRQTIQHNGPTANFEYN
IRVRCDENYYGNKCNKQCRPRNDDYGHYVCDQFGNRGCLEGWMGPYCTAAICKQGCNLLQ
GFCNAPGECMCKYGWQGPFCDDCLPYPGCVHGTCVKPWLCSCEKNWGGLLCDKDLNYCGT
NKPCKNGGTCMNSEPDEYNCACSDSYSGKNCEIVEHSCVSNPCANGGTCHEIPSGFECHC
PAGWSGPTCAKDMDECASNPCTQGGTCIDMENGFECLCPPQWAGKTCQIDANECMENPCL
NAYSCKNLIGGYHCACFRGWAGQNCDINVNSCHGLCQNGATCKEGRRGYVCACSPGFVGR
HCEVQRNSCVSGPCRNGGRCHTLLDGFMCECPHGYTGTTCEVQSNPCSPNPCQNKAQCHS
LMEDFYCACPDDYEGKTCSELKDHCKTNPCEVIDSCTVAVATNDTQEGVWYISSNVCGPH
GRCISQPAGNFTCSCEPGFTGTYCHENVNDCVSSPCKNGGTCIDGISSFQCFCPDGWEGM
LCVMDVNECSRNPCKNGGRCVDLVNDFYCQCQDNWKGKTCHSRESQCDSSTCSNGGTCFD
HGDTFRCTCLSGWGGSTCNTGKNSTCDSNPCENRGTCVGGGDAYTCICKDGWEGPTCAQN
TNDCNPTPCYNSGVCVDGVNWFRCECAPGFAGPDCRINIDECQTSPCAYGSTCVDEINSF
RCVCPLGWAGPRCQEFIGIGKACRYSGLQFPHGSQWEEECNTCQCVNGSVRCSKVQCGRR
PCLLHRFASGPDSIAPCPRGQECVEHKFLTCFTPPCHQWGVCSTPDPPPALHTQCEPNCG
YLDNSCARITLIFNRDKVPQGTIVENICLELRYLPITQTLAKERTLLILCDLSYSNSDAV
EVAMSYDQDGQERDGNRDQIQEAASAIIGALSKRHNSTVMLAVVEVKVETQVMPQSVDHL
VPVLCVVFSVLWIFCIVVCVWWTRKRKKERERESAVEDSTVNNLLEPLRVILPQRIDNLD
KDIQYECKKLMSPPDRTCDGAEGEEEEELRRGGMKLDKCSTQKCSLAGVQDRVMCKGGVI
CTMRSAPVKTPHRTVHSPKDNRCKNLSAANFSEDVKDHYV
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtatggggatttcgaagtgtctgtcaatagtgtgtcttctgttggtgtgg
actgaggtgtcccagtcttcgggctcttttgagctgcagttgattgctgtacagaacgct
aacggtcagttgtcggacggggactgctgcgacggagaaaggaacgcgcaggatctccac
tgtagcagggatgagtgtgatacgtacttcagagtgtgtctaaaggaataccaaacggag
gtcacgaccacaggcttgtgcatctatggaactggatctactaacgttatcggtgggaat
acttttcaatttaagagcaccaaaaacaaccaaaaccgaatcaacgacggtggaaagatt
gtcatcccattccagttcgcttggccgcgggcgtacactctgattgtggaagcgtgggac
tgggacaatggtacacacagcagcagtggaacaatgcagcttcacacaaagcagcttctt
agcagcacaagaggaataaaagtccccaatacaaagcccagactccagatgattgaaatg
gactgtcaagttgagctgccatataccaaccacagcaaacagatccatacaacaactaca
gtggcaagaaaaagtgaggatctgttaattgagcggagtgtccgtaaaggaatgatcaac
cctggcgatgacaggcagactatccaacacaacggtcctacagccaactttgagtataac
atccgtgtgcgctgtgacgagaactactatggcaacaagtgcaacaagcagtgccggcca
cgcaatgatgactatggccactacgtgtgtgaccagtttgggaacagaggctgtttggag
ggctggatggggccttactgtacagctgctatctgcaagcagggctgtaacctgctgcaa
ggattctgcaatgccccaggagaatgcatgtgtaaatacggttggcagggtccgttctgt
gacgactgcctgccctacccaggctgtgtccatgggacctgcgtcaagccctggctttgc
agctgtgagaagaactggggaggcctgctgtgtgacaaagatctgaactactgtgggacg
aacaagccgtgtaagaacggaggaacgtgtatgaactcagagccagatgaatacaactgt
gcctgttctgacagctactcgggcaagaactgtgagatagtggaacactcatgtgtgtcc
aacccttgtgccaacgggggcacctgccatgagatcccgtctgggtttgagtgccactgt
cctgcaggctggtcagggcccacctgcgctaaagacatggacgagtgtgcgtctaacccc
tgtactcagggtgggacctgcatcgacatggagaacggatttgagtgcctctgcccccca
cagtgggctgggaagacctgccagatagacgctaatgagtgtatggagaacccatgcctc
aatgcttactcttgcaaaaacttgattggtggatatcactgtgcctgctttcgaggatgg
gccggccagaactgtgacatcaatgtcaacagctgccatggactgtgtcagaatggagcg
acttgcaaggaggggcgtagaggctacgtgtgtgcctgctcaccggggtttgtgggccgg
cactgtgaggtccagaggaacagctgtgtcagcggcccgtgtagaaacgggggcaggtgc
cacaccctgctggacggcttcatgtgtgagtgcccacatggatacactggcactacctgt
gaggtgcagagtaacccgtgcagccctaacccttgccagaacaaggcccagtgccacagt
ctgatggaagacttctactgtgcctgtcctgatgactatgagggcaagacctgctctgag
ctcaaggaccactgcaagaccaatccctgtgaagtgattgacagttgtactgtcgctgtg
gccaccaacgacacacaggaaggggtgtggtacatctcgtccaatgtgtgcggcccccac
ggacgctgcatcagccaacctgctgggaacttcacctgttcctgtgaaccgggcttcact
ggaacatactgtcacgagaatgtaaacgactgtgtgtcatctccctgtaagaacggagga
acttgcatcgacgggatcagctctttccagtgcttttgccctgacggctgggagggcatg
ctgtgtgtcatggatgtgaatgagtgcagtaggaacccctgtaagaacggaggtcgctgt
gtggacctggtcaatgacttctactgtcaatgccaggacaactggaagggcaagacctgc
cactcacgtgagagccagtgtgactccagtacctgtagtaatggggggacgtgctttgac
cacggggacacctttcgctgtacctgtttgtcagggtggggcggcagcacctgcaacaca
ggcaagaacagcacgtgtgactctaacccatgtgagaacagagggacctgtgtcggaggg
ggtgatgcctacacctgcatctgcaaggatggctgggaggggcccacatgtgctcagaat
actaatgactgcaaccctaccccctgctataacagtggtgtctgtgtggatggtgtgaac
tggttccgctgtgagtgtgccccgggattcgccggaccagactgccggatcaacatagat
gagtgccagacgtctccctgtgcctatggttctacctgtgtggatgagatcaacagcttc
cgctgtgtgtgtcccctgggctgggctgggcctcgctgccaagagttcatagggatcggg
aaggcctgtcgttactccggcctgcagttccctcatggcagtcaatgggaggaggagtgt
aatacctgccagtgtgtcaacggcagtgtgcgctgttctaaggtgcagtgtggccgacgg
ccctgtctgctccatagatttgcttccggtccagacagcattgccccctgtcctagagga
caggagtgtgtagagcacaaattcctcacctgcttcaccccgccatgccaccagtggggc
gtgtgttctacccctgaccctccaccggccctccacactcagtgtgaacccaactgtggt
tatttggacaacagctgtgcccgcatcacactcatcttcaatagagacaaagttccacag
ggtaccattgtggagaacatctgtttggagctgaggtaccttcccatcacccagaccctg
gctaaggaacgtacgctcctcattctctgtgacctgtcctactccaacagtgatgccgtg
gaggttgccatgtcttatgatcaggatggtcaggagcgggatggaaaccgtgatcagatt
caggaggctgccagtgccatcatcggtgccctgtccaaacgacacaacagcaccgtcatg
ctggctgtggtggaggtcaaagtggagacgcaggtcatgccccagtctgtggaccacctg
gtgccagtgctgtgcgtggtgttcagtgtgctgtggatcttctgcatcgtggtgtgtgtg
tggtggacccgtaagaggaaaaaagagcgtgagagagagtctgcagtggaggacagcact
gtcaataaccttctggagccgctgagggtcatcttgccacagcgcatagacaacctagac
aaagacattcagtacgaatgcaagaaactcatgagccctccagaccggacgtgtgacggg
gctgagggagaggaggaagaggagctgaggaggggagggatgaagctagacaagtgctcc
acacaaaagtgctcattggcaggagtgcaggacagagtgatgtgcaaagggggggtgatc
tgtacgatgcgtagcgcccctgtgaaaaccccccaccggacagtgcacagtcccaaagac
aaccggtgtaaaaacctcagcgctgccaatttcagtgaggatgtcaaagatcattacgta
tga
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