Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383386
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Entry
139383386 CDS
T10872
Name
(RefSeq) EMILIN-1-A-like
KO
K24246
emilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139383386
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
139383386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMI
C1q
Baculo_PEP_C
ATG17_like
Seryl_tRNA_N
DUF4407
Apolipoprotein
FapA
AATF-Che1
Spectrin
Uds1
IFT57
DUF6062
Sec10_N
CCDC39
Hydro_N_hd
OmpH
E2R135
Prefoldin_2
FlxA
Motif
Other DBs
NCBI-GeneID:
139383386
NCBI-ProteinID:
XP_070984012
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All DBs
Position
25:39200944..39287881
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AA seq
1168 aa
AA seq
DB search
MAGPVMFLFLWVLTWFGEIRGASYPQRYNLYSGQTQALPQNGVRAASRHRNWCAYVVKKT
VSCVVEDGVETYVKPDYHPCSWGTQCSRMVTYRTYMKPRYKVAYKMVTDMEWKCCHGYTG
DDCSEGPSGGSGTQIATARPKPSRPGQTGTDTGHRGQNGGDGRGDSDKTRQLEDKIQSLN
KDLQDLQSTLRGMNESFQEEMRKPGFSGGSTKAPADAAQPEIKDTIHSIQTKLDQLDNRT
QAHDKTLVSINNHLVNGNGSGGNDLGAGTGDSSGGTGGISSRKLNTLKEEILRELERRVS
LSCSSCQSGVEDLRRQQQEDRERIRALEKQLNAVDGRYRQSLDGLRREVTRSQGCCDSVT
DLKDRVTDAERKISSISENYDVIQNRLDKELGSGGGSNVGGGFPGGGGGFVHGGGGFGLG
GGSELPRVIEDRLDGHLRDLERWVKSTMQHTKETEKDLKDYFNRELGDLRTVFLDRFDDQ
GYRIGDIELDVGIVKDLVSDHDKNVTRLANSTALLDKSLTDCGCGGTGGGGGVGGGGRED
GGGSRGTGGTGGMGGRGSEGGAGEGGRGDTGGTGTEGRRDGGSGGTGGTGGGWGGAGGDG
GNDYDGDSVKSITWRVVANEDEIRRFDTRIKDLSISGDSLMDKVLDLSHDIRKIKALTGD
NGEHFNRIVTEIETLGRGMDDCDVCGRVEDEFKKLKNHTLNRWEKDINAIRNRVDSNHSF
CSTLQEEVGKLREVVGKCSDQCKIHLETPTTGGGTGERGLDEPDKPLDGHSVIGGTSNNG
HLKSLQGELSEVILTFSSINDTLRGLEHTVQKHGSVITDLGNTKDKIISELDKIQQEVTE
HIEKSRDRLDGVDRDVRRFERTLVVEVGDCKRSGDGLEKRLFKMEGVCGRLDGVSDSLQR
IKEGLTKHMSGLWNCVNGLNATVISHGGIIESIQTTQLDGIHGKIKNLNSSVSHILTEFQ
NLSEQDLTGLPGPPGPSGERGFQGLPGAKGPQGRDGPPGRQGENGPRGSPGLKGEQGMPG
ADANVPKLSFSAALTYPMLSAGTIVFDKIFVNEGEFYDPRTGIFTAPVDGRYFFSAILTG
HKNEKIEAVLSKSNYGMARVDSGGYQPEGLENKPVAEAKITPGSLAVFNIILPLQAGDTV
CVDLVMGKLAHSVEPLTIFSGMLLYEHM
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccagttatgtttcttttcctgtgggtgttgacttggttcggggaaattcgg
ggtgcttcgtacccgcagcggtataatctctactccggacagacccaggcgctgccacag
aacggcgtccgggcggcaagcagacacagaaactggtgtgcgtatgtagtgaagaagaca
gtgagctgtgtggtggaggatggagtggagacctacgtgaagcctgactaccacccctgc
tcctggggcacgcagtgttcccgtatggtgacgtatcgaacgtatatgaagccgcggtac
aaggtggcctacaagatggtgacggacatggagtggaagtgttgccatggttacaccgga
gatgactgtagcgaagggccgagcggcgggtcggggacccagatcgctacagccagaccc
aaaccgtcccgaccgggacagaccggaaccgacacaggtcacagaggacagaatggggga
gacgggcgaggcgacagcgacaagacgcggcagctggaggacaagatccagagcctaaac
aaggacctccaggacctgcagtccacgctgaggggcatgaacgaaagcttccaggaggag
atgcgcaaaccgggcttcagtggtggtagcaccaaggccccagcggatgcggcccagccg
gagattaaggacaccatccacagcatccagaccaaactagaccagctggacaaccggaca
caggctcacgacaagaccttggtcagcatcaacaaccacctggtcaacgggaatggcagc
ggtgggaatgatcttggcgctggcactggcgactcctctggaggcaccggtgggattagc
agcaggaagctcaacacgctgaaagaggagatcctgagggagctggagagaagggtgtct
ctgtcctgctcctcctgccagtcaggggtggaggacctacggagacagcagcaggaggac
agggagcggatccgtgcgctggagaagcagctgaacgctgtggatggacgatatcgccag
agcctggacggcctgcgccgcgaggtgacacgctcccagggctgctgcgattctgtcacc
gacctcaaggacagggtcacagatgctgaaaggaagataagctccatatcagagaactat
gatgtcatccagaaccgcctggataaggagctgggcagtggcggtggtagtaatgtaggt
ggaggtttcccaggaggtggaggtggctttgtccatggaggtggtggttttggccttgga
ggtggcagcgagttacccagggtgatagaggacaggctggatggtcatctgagggacctt
gagaggtgggtgaagagcacaatgcagcacacaaaggagacagagaaagacctgaaggac
tacttcaaccgtgagctgggtgacctccggaccgtgttcctggaccgtttcgacgaccag
ggataccgcatcggcgacatagagctagacgtgggcattgtaaaggacctcgtgtcggac
cacgacaagaatgtgacccgcctggcgaactccacggcactactagacaagagtctgact
gactgtggctgtggaggaacaggaggaggaggaggagttggaggaggtggaagagaagat
ggaggaggaagtagaggaaccggaggaacagggggaatgggagggagaggatctgaaggt
ggggcaggggaaggaggaaggggagatacaggaggaacaggaactgaaggaaggagagat
ggaggaagtggaggaacagggggaaccggaggaggatggggaggagctggaggggatgga
ggaaatgattacgacggagactctgtgaagtctatcacctggagggtggtggccaatgag
gacgagatccgacgctttgacacgcggatcaaggacctgtccatctcgggcgactcactc
atggacaaggtgctggatctcagccacgacatccgcaagatcaaagccctgaccggagac
aatggagagcacttcaaccgcatcgtcacagaaattgagacgctcgggcgcggcatggat
gactgcgacgtctgtggaagagtggaagacgagttcaagaagctgaagaaccataccctg
aaccgctgggagaaggacatcaacgccatccggaaccgggtggattccaaccatagcttt
tgctccaccctacaggaagaggtggggaaactccgggaggtggtagggaagtgtagcgac
cagtgtaagatccacctggagaccccaacaacaggaggtggcactggagaacgaggcctg
gatgaacctgataagcccctggacggccacagtgtgatcggaggcacgtccaacaacggc
cacctcaagtccctgcagggcgagctgtccgaggtcatcctgacctttagctccatcaac
gacacgctgaggggcctggagcacacagtgcagaaacatggcagtgtcatcacggacctg
ggcaacaccaaggacaagatcatctctgagctggacaagatacagcaggaggtgactgag
cacattgagaagagccgcgaccgcctcgacggggtggatcgcgacgtgcgacgcttcgag
agaaccctagtggtggaggtgggcgactgcaagcgatctggcgacggcctggagaagagg
ctgttcaagatggagggcgtgtgcggacggctggacggcgtctccgactcgctccagaga
atcaaggaggggctgaccaagcacatgtcgggcctgtggaactgtgtgaacggtctgaac
gccacggtcatctcccatggagggatcattgagagcatccagaccactcagctggacggg
atccacgggaagatcaagaacctcaactcgtccgtcagtcacatcctcacggagttccag
aatctttcggaacaggacctgaccggcctgcctggtcctccaggtccctctggggagaga
gggttccaagggctgcctggcgctaaggggccccaaggcagggacggacccccgggcagg
cagggagagaacgggcccagaggatcaccaggcctcaaaggtgaacaaggtatgccaggt
gccgatgccaacgtccccaagctgtccttctctgccgctctcacctaccccatgcttagt
gctggcaccatcgtcttcgacaagatctttgtcaacgagggagagttctatgacccgcgg
actggcatcttcacggcgcccgttgatggccgctacttcttcagcgcaatcctgactggc
cacaagaacgagaagattgaggcggtgctgtccaagtccaactacggtatggcccgtgtg
gactccgggggataccagccagagggactggagaacaagccggtagccgaggccaagatc
accccgggctccctggctgtgttcaacatcatcctgcccctccaggccggagacacagtc
tgcgttgacttggtcatgggcaagctggcccactctgtagagcctctcaccatcttcagt
ggaatgctgctgtatgaacatatgtaa
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