Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383404
Help
Entry
139383404 CDS
T10872
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139383404
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139383404
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SALM family
139383404
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139383404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
fn3
LRR_9
Ig_2
Ig_C17orf99
LRR_14
LRRCT
GP79
DUF3951
Sp38
Motif
Other DBs
NCBI-GeneID:
139383404
NCBI-ProteinID:
XP_070984045
LinkDB
All DBs
Position
25:3127754..3368868
Genome browser
AA seq
797 aa
AA seq
DB search
MDKVLSSLLLLGTAVIMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDIDRRTVELRLG
GNFILKVTPQDFANMTGLVDLTLSRNTISAILPFSFLDLETLRSLHLDSNRLTELGPDDL
RGLVNLQHLILNNNQLNCISKVAFDDLMLTLEDLDLSYNNLRGVPWESICKMVNLHQLSL
DHNLISHIAEGTFTDLDKLARLDLTSNRLQKLPPDPIFTRSQTNLILTTPYAPQLSLSFG
GNPLHCNCEVLWLRRLDREDDMETCASPPSLKGRYFWSVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAIGDPMPIIHWVAPDDRLISNSSRATVYDNGTLDITITTSKDYGTFTCI
AANAAGESTASIELSIIQLPHLSNGTNHTAQPKSRLSDITSSTKTSKGESKPLPEKVVSV
SEVSASSALVKWTVSKTAPKVKMYQLQYNCSEDEVLIYRMIPVASKTFLVTNLVQDMQYD
LCVLAIWDDTATTLTATNVVGCVQFITRDNYPQCQSLQSQFLGGTMILVIGGIIVVTLLI
FIIILMVRYKVCSSPHSSKLPVVSNTYSQTSSGSTQVKPQITTTVVVMRDEMVEFKCGSL
QSSLSSSSSDSLDSRKTRGRLGNEDQYSLRDIEFSTLPSTSNWRRHRGPSSAKARPNLDN
LLGAFASLELRSSATTRDQGASCSSTTTSSALVAVTMAPPSDKEPLLGRAESTTMLGRFL
GLPQEGKPKRSHSFDYGHVGSSGGAQSLSNYPRHISNIWTKRSLSVNGMLLQYDDSEDGE
AEEVPFESSEWVMESTV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtgctcagcagcctcctgcttctgggaaccgcagtgattatggcccatgca
tgccccaagtactgtgtctgccagaacctgtctgagtccctgggtaccctctgcccatcc
aaaggcttgctcttcgtacctctggacatagacaggcggaccgtagagctccgcctgggc
ggcaacttcatcctcaaggtcacaccgcaggactttgccaacatgacaggcctggtggac
ctcaccttgtcccgcaacaccatcagtgccatcctgcctttctccttcctcgacctggag
accctgcgctccctgcacctggacagcaaccgcctgaccgagctgggaccggacgacctg
cgtggccttgtcaacctgcagcacctcatcctcaacaacaaccagctcaactgcatctct
aaggtggcttttgatgatctgatgctgacactggaagacttggacctgtcctacaacaac
ttgcggggtgtaccttgggagtccatctgcaagatggtcaacctccaccagttgagtctt
gatcataacctcatctcgcacatcgcagaggggacatttacggacctggacaagctggcg
cgcctggacctcacgtccaaccgtctccagaagctcccgccagaccccatcttcacccgt
tcccagactaacttaatactgaccactccctacgctcctcagctttccctgagctttggg
ggaaaccccctgcattgcaactgtgaagtgctttggctccggaggctagaccgagaggac
gatatggagacctgcgcttcccctcccagtctaaagggacgctacttttggtccgtgcgg
gaagaagagtttgtctgtgaaccgcccctgatcacccaacacacgcacaagttgttagtc
ctggagggccaaacagctagcctacgctgcaaagctatcggcgacccaatgccgatcata
cactgggtcgccccagacgaccgtttgattagcaattcgtcccgagcgaccgtgtacgat
aacggcaccctggatattaccatcaccacgtccaaggattacggcaccttcacttgcatc
gcagccaacgcagcaggggaatcgactgcctctatagaactatccatcattcaactgcca
cacctcagcaatggtaccaaccacaccgcacagcccaagtcccggctctcggacatcacc
agctctaccaagaccagtaagggggagtccaagcctctaccggaaaaggtggtatctgta
tcggaggtgtctgcatcctctgctctggtcaagtggactgttagcaaaacagcacccaag
gtcaagatgtaccagctccagtacaactgctccgaagatgaagtcctgatttacaggatg
attcccgtggccagcaaaacctttttagtcaccaacctggtccaagacatgcagtacgac
ctatgtgtcctggctatctgggacgacactgccaccaccctaactgccaccaacgtagtg
ggctgtgtgcagttcatcacccgtgacaactacccgcagtgccagtccctccaaagccag
ttcctgggcggcactatgatcctggtgataggtggcatcatcgtggtcacgctcctcatc
ttcatcatcatcctcatggttcggtacaaagtgtgcagcagcccgcattccagtaagctg
ccagtggttagcaacacgtactcccagaccagcagtgggagtacgcaggtcaaacctcag
atcacaaccacagtggtggtaatgcgggatgagatggtggaattcaaatgtggatcgctc
cagagcagcctctcctcgtcttcatctgactcgttggacagtcgcaaaactagaggcaga
ttaggaaacgaggaccagtacagtcttcgagacatcgagttcagcacactccccagcacc
agtaattggaggaggcacagggggccatcatcagccaaggctaggcccaacttggacaac
cttttaggggcttttgcctcactggagctccggagctcggctacgactagggaccaaggg
gcatcttgttcctccaccaccacctccagtgcattggtggctgtgaccatggcccctccg
tctgacaaggaacccttgctgggccgagccgagtccaccaccatgctggggcgttttctg
ggcctgccccaggaagggaagcccaagaggagccactcattcgactacggccacgtgggt
agcagcggtggcgcacagagcctcagcaactaccctcgtcacatcagcaacatctggact
aagaggagcctgtcggtaaacgggatgctactgcagtacgacgacagcgaagacggtgag
gccgaagaggtgccattcgagagctcagagtgggtgatggagagcactgtttaa
DBGET
integrated database retrieval system
