Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383471
Help
Entry
139383471 CDS
T10872
Name
(RefSeq) claudin-20-like isoform X1
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139383471
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139383471
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139383471
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139383471
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139383471
04147 Exosome [BR:
ocla04147
]
139383471
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139383471
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139383471
Exosomal proteins of colorectal cancer cells
139383471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
139383471
NCBI-ProteinID:
XP_070984124
LinkDB
All DBs
Position
25:complement(14573371..14581932)
Genome browser
AA seq
334 aa
AA seq
DB search
MASLRLKSSSPPPHPVFLCVYRNHCEQPDASKRSSAPAESIGAGTEELSRRLLPVLAPES
STAVWGEEPRCLAGAGWMVTGGVGGHGRRRRMASTGMQIFAFVLALLGIMGAMMATLLPN
WKVSADVGSNIITAISQMQGLWMDCTWYSTGMFSCTLKYSVLSLPAYLQTARTTMVLSCV
MAAMGLCLASLGLKCTRWGGGRRAKRHAAIASGGCFIAAGFLCLVPASWFTKEVITNFLD
RSVHESNKFEPGGAVYVAFLSAGFLFVGGSIFCVSCSGKRPGHQDMILLPPPDKLLLQQQ
QHLLQQQQQDQLQHQYCSLSPLDNKTGYSLQDYV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctaaggctgaaatcctcctcgccccctcctcaccccgtgtttttgtgtgtt
tacagaaatcactgcgaacaacctgacgcgtcaaaaaggagctctgcaccagccgagtcc
attggagccggcactgaggaactgagtcgtcggctgctgccagttctagcaccagaatcc
tctacagccgtctggggtgaggagccgaggtgcctggctggggctgggtggatggtaact
ggaggagtagggggccacggcagaaggaggagaatggcatccacaggcatgcagatcttt
gccttcgtcctggcgctgctgggcatcatgggggccatgatggctacgctgctgcccaat
tggaaggtgagcgccgatgtaggctccaacatcatcacggccatctcccagatgcagggg
ctgtggatggactgcacctggtacagcaccggcatgttcagctgcaccttgaagtactcg
gtgctgtcgctgcccgcctacctgcagactgcccgcaccactatggtgctgtcctgtgtg
atggctgccatgggcctgtgcctggcatccctggggctcaaatgtactcgctgggggggc
ggccggcgcgccaagaggcacgcggccatcgccagcgggggctgcttcatcgccgccggc
ttcctgtgcctggtgcctgcttcctggttcaccaaagaggtcatcactaacttcctggac
cgcagcgtgcacgagagcaataagtttgagcccgggggcgccgtgtacgtggccttcctg
tcggcaggcttcctctttgtgggggggtccatcttctgcgtgtcgtgctcggggaagagg
cccggccaccaggacatgatcttgctgccgccccccgataaactcttactgcagcagcaa
cagcacctcctacagcaacagcagcaggaccagctccagcaccagtactgctccctctcc
ccactagacaataaaacaggctacagtctgcaggactatgtgtag
DBGET
integrated database retrieval system
