Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383610
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Entry
139383610 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 7B-like
KO
K21843
tetratricopeptide repeat protein 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139383610
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
139383610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_2
TPR_14
TPR_1
TPR_8
TPR_16
TPR_19
ANAPC3
TPR_9
TPR_12
TPR_CcmH_CycH
TPR_17
Dimer_Tnp_hAT
TPR_10
TPR_11
ARM_TT21_C
TPR_15
TPR-S
Iml2-TPR_39
HTH_SUN2
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
139383610
NCBI-ProteinID:
XP_070984267
LinkDB
All DBs
Position
25:complement(27285864..27406279)
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AA seq
1121 aa
AA seq
DB search
MTARKSGSRLETEIERSRSEGQWDKIPELVLQLSAKLISNDDLGNLLLGKAKLQQYLKEN
PIKXGASPRGPRPQLVEVRKHLTAALDRGNLKPDYMQEASMLMAKLSYVEGDYSEAFNQY
GKVTLDELALVGAPVYRPSMIAEAYATKDLCLEKVPAASPSLSNYNVDKDQEVITCYEKS
GDIALLYLQEVEKALSAGLQNRSPKPGPVAQEQELGYFLETGLQRAHVIHLKNGNLTQGV
GRFREILRAVXTRTTQNLRLTIAKQLAEILLRGMCEQSYWSSLEDPPSKSHLDDPLLCQG
APYLKDYALSRRPRVYSGENLFCPQENTEEALLLLLISESIANRDAVLSRIPEHNSDRII
SLQSASVVYDLLTIALGRRGQYERLSECLERAMKFAFEEFHLWYHLALSLMAAGTSARAV
KVLKECIRLKPDDPTIPLLAVKLCIGALHWLEEGECFAKMVVDMGEKASEFRAKGYLAIG
LVYSLKATDASLRGMQEEYQKKALGAFQRAQSLSPTDHLAAFYLALELAVSRQIPEALGY
VRQALQLQGDDVHSLHLLALLLSAQKHYHDALNIIEMALSDYPENFILLFTKVKLETLCQ
GPEEALLTCKHMLQIRKSCYNLTNPSDSGRRSSLLDRAIADRWTLNAMTLPDFSDPETGS
VHTTSMAATNTQLWKKAVTESPKHNRTKRRGDRQRQEEQRCQDYWTWEQNLDYTTWEEID
RWAVDPGRVPEPAWDSLEQCEEGYRRMELEKRARRHEPSASQELLRAVSQPGAARAVSQP
GAAKAACHAGDAGISLLSSGTFPSSGALYDDLQSGARCEGPLSAPKPPPSFLDEPEAAKV
DTDSCVQEALKLTGVQVREEPQSTSSTSTTPTAASEGKGLAGLLRNITSRQQRGEEGQIP
TTPEHRVKEEIKVYLSLPPIPAEEDPLVWWRGHASELPHLATVARKFLCIPATSVPSVFS
AIGHIVSPRRSLLKMDKLFLAEVYIGMGKPAEATACTQEAANLFPMSHNVLFTRGQVAEL
RGNVDEAKRWCEEALSISPTHVKTMQRLGLILHQLQRYSLAEKILRDAVQVNSTAHDVWN
SLGEVLQAQGHGGAATECFLTALELEASSPILPFTIIPRQL
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgagaaagtctgggtcacgactcgagacagagatagaacgaagccgttcggaa
gggcaatgggacaagataccagagcttgtactgcagctctctgccaaactaatatcaaat
gatgacctggggaatctgctgctggggaaagccaagctccagcagtacctcaaggagaac
cccatcaagncaggagccagcccgaggggcccaagaccccagcttgtagaggtccgcaag
cacctgaccgctgccctggaccgagggaacctcaagccggactacatgcaagaggctagt
atgttgatggccaagctgtcctatgtggagggagactatagtgaggccttcaaccagtat
ggcaaagtgaccctggacgagctggcactggtgggagcccccgtctaccgtccctctatg
attgccgaagcatacgctaccaaagatctgtgtctagagaaagtcccggctgcatctccg
tccctgtccaattataacgtggacaaagaccaggaagtgattacctgctatgagaagtct
ggagacattgccctgctctacctacaggaagtagagaaggccctcagtgcggggttgcag
aaccgcagtccaaagccaggtccagtggcccaggagcaggagctgggatacttcctggag
acgggacttcagagggcacatgtcatccacttaaaaaatggtaacctgacccagggagtg
ggccgcttccgggagatcctccgagctgtanngaccaggaccacacagaacctacgactg
accatagccaaacagctggcagagatcctgctgagggggatgtgtgagcagagctactgg
tcttctctggaggaccctcctagcaagtcccacctggacgaccccctgctatgccaggga
gccccctacctcaaggactacgccctcagccgcaggccacgcgtctactccggagagaat
ctgttttgtccacaggagaacacagaggaggctctgctcctgttgctgattagtgaatct
atagccaacagagatgcggtgctgagcaggatcccagagcataacagcgaccgcatcatc
agcctgcagagtgcctctgtggtctacgacttgctgaccatcgccctggggcgacgggga
cagtatgagaggctctctgagtgtctagagagggccatgaagtttgcctttgaggagttc
catctctggtaccatctagccctgtcactgatggctgctgggacgtcggccagggcggtg
aaggtattgaaggagtgtatccgtctgaagccggatgaccccaccatccccttactagct
gtcaagctgtgcattggagcactccattggctggaggaaggagagtgttttgctaagatg
gtggtggacatgggggagaaggcctcagagttccgagctaaaggttacctagccatcggc
ttggtgtacagcctcaaggccacagacgcttccctacgggggatgcaggaggagtatcag
aagaaggccctgggtgcgttccagagggcccagagcttgtcccccacagaccacctggct
gccttctacctggccctggagctggctgtgtcacgacagatcccggaggcgcttgggtac
gtgcgtcaggctctgcagctgcagggagacgacgtgcactctctccacctgctggcgctg
ctgctgtcggctcagaaacactaccacgacgctctcaacatcatcgagatggccctcagc
gactatcctgagaacttcattctgttattcaccaaggtgaagctggagacattgtgtcaa
ggacctgaggaggctctgctcacctgcaaacacatgctacagatccggaagtcctgttac
aacctcaccaaccccagtgattcgggtcgacgcagcagcctgttggacagagccatagca
gacagatggacactaaatgccatgacgctgcctgacttcagtgacccagagacaggctca
gtccacaccacatccatggcggctactaacacacagctatggaagaaagccgtgacagaa
tcacccaaacacaacaggaccaagcggcgtggtgacaggcagcggcaggaggagcagcga
tgtcaggattattggacttgggagcaaaatctggactatacgacttgggaagagatagac
aggtgggcggtcgacccagggagagtgccggagcccgcctgggattcgctggagcagtgc
gaggagggttacaggagaatggagttggagaaacgagcacggcggcacgaaccgtcagcc
agccaggagctgctcagagccgtcagccagccaggagctgccagagccgtcagccaacca
ggagctgctaaagccgcctgtcatgccggcgatgctggaatttccctcctgtccagtggc
acctttccatccagtggcgccctctatgatgatcttcagtccggggcccgctgcgagggt
ccactttccgcacccaagccgccaccgagctttttagatgagcctgaggctgcaaaagtt
gacactgacagctgtgtccaggaggccttgaagctgacaggtgtacaagtcagggaagaa
ccacaaagcaccagcagcacctccaccacccccacagcggcatcagaggggaaaggcctg
gctgggttgctgagaaacattacctcaaggcagcagagaggtgaagagggtcagattccg
accaccccagaacacagagtgaaagaagagatcaaggtctacctgtctctgccacccatt
ccagcagaagaggatccactggtgtggtggaggggccatgcatcagagctgcctcacctt
gccacggttgccaggaagtttttgtgcatcccagcaaccagcgtgccatcagtgttcagt
gccatcgggcacattgtctcccctcgcagatcactacttaaaatggacaaactctttcta
gcggaggtatacattggcatgggaaagcctgcggaggctacggcctgtacacaggaggct
gccaacctgttccccatgtcccacaacgtgctgttcacgcggggccaggtggctgagctg
cggggtaatgtggacgaggccaaacgctggtgtgaggaggccctctccatcagccccacc
cacgtcaagaccatgcagagactgggtttgatcctgcaccagctgcagcgttacagcctg
gcagagaagatccttcgggacgcggtgcaggtgaactccacggcccacgatgtgtggaac
agcctgggggaggtgctgcaggctcagggccatggtggcgcggctacagagtgtttcctc
accgccctggagctagaggcctccagccccattttgccctttaccatcataccacgacaa
ctctga
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integrated database retrieval system
