Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383669
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Entry
139383669 CDS
T10872
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139383669
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139383669
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139383669
G protein-coupled receptors [BR:
ocla04030
]
Rhodopsin family
Others
Platelet activating factor
139383669
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Ortholog
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Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
139383669
NCBI-ProteinID:
XP_070984304
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Position
25:complement(7198812..7208208)
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AA seq
372 aa
AA seq
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MGDKEDLVVTTAVNFVGNGNFLDSAFRYTLFPVFYGVVFILGLISNSYVLFVLWRLRDAK
ALNEICIYMANLTVADLLFVSALPFWIGYYHHGGVWLYGKFLCRVTGVFFFINTYCSILF
LAAISINRYWAITRPLDAASSDHWCRGVAVTAVIWGVTLSMSVPYLVKTGIQKDKSNVSR
CFEGYHHETDGEKRLVAATHLIIVGCFVLVFFLVVVCNLLIARALLAQSLTQARGSSSSK
PRGVKGRALQMLCAVVGVFVVCFLPHHMVQGPWTLAVLEIKEGWGSTEWSQKTKQWLNDT
HQVTLMLMGLNCLFDPVVYCFATRRFHMYIKDHLKKVGRGRACSETAITHISIVECKNVS
QRLHSEQQQLNN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggggataaagaggacttagtagtgaccacggctgtgaactttgtcgggaacggaaac
ttcctggactctgcgttccgctacaccctcttcccagtgttctacggtgttgtgttcatc
cttgggctgatatccaatagttacgtgctgttcgtgctgtggcgcctgcgcgatgccaag
gccttgaacgagatctgcatctacatggccaacctgactgtggccgacctcctctttgtg
tccgccctccccttctggattggctactaccatcatggtggcgtctggctctacggcaaa
ttcctgtgccgtgtcaccggcgtgttcttcttcatcaacacctactgctccatcctcttc
cttgctgccatcagtatcaaccgctactgggccatcacgcgtccgctggatgccgcctcg
tccgaccattggtgccgtggggtggccgtcacagcggtcatctggggggtcactctgtcc
atgtctgtgccatacctcgtgaagacaggcattcagaaggacaagagcaacgtgtcgcga
tgcttcgagggctaccaccatgagacggatggcgagaagcggctggtggccgcaacccac
cttatcattgtggggtgcttcgtcttggtcttcttcctcgtcgtagtgtgtaatctgctc
atcgcccgggcgttactagcccagtcccttacccaggctcggggctccagttcctccaaa
ccccggggggtgaagggccgggccctgcagatgctgtgcgctgtggtgggggtgttcgtg
gtgtgcttcctcccccaccacatggtccagggcccctggaccctggctgtgctggagatc
aaggagggctggggcagcacggaatggagccagaagaccaagcaatggttgaacgacacc
caccaggtcaccctgatgctgatggggctcaactgcctcttcgatcccgtggtgtactgc
ttcgccaccaggaggttccacatgtatatcaaggaccatctgaaaaaggtggggaggggc
agagcctgctcggaaacagccatcacacacatctctatagtggaatgcaagaatgtgagc
cagcggctccatagcgaacagcagcagctcaataattaa
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