Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383674
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Entry
139383674 CDS
T10872
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139383674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139383674
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
139383674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
PH
Ank_4
Ank_5
SH3_9
Ank_3
SH3_1
SH3_2
PH_2
Motif
Other DBs
NCBI-GeneID:
139383674
NCBI-ProteinID:
XP_070984309
LinkDB
All DBs
Position
25:complement(6088947..6140503)
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AA seq
1024 aa
AA seq
DB search
MSSVGPFYLESNMPEHISISDFVALTNEDLASPTTSIFQSKMSECRNTVSAVEESMDMDQ
NTLQRMKKMVKAIHSSGISHAENKEQYIDVLENLGNSHLTQDNNEVSTGFLNLAVFTREV
TALFKNLVQNLNNIISFPLENILKSELRDSRLELKKQLEKSWKDYDIKVGKLEKERREKS
RQLGLTKTEGHNVTEDMERERRTFQLQMCEYLLKIQELKVRQGPDLLQSLIKYFQAQLNF
FQDGLKAAENLSPFVEKLASSVHTVRQDQDEEVRQLSQLRDSLRLLLQVEGKEEYLNRKN
SGNGYSIHQPQGNKKYGTEKSGFLQKRSDGIRKVWQKRKCGVKYGCLTISHSTINRPPAK
LNLLTCLVRPNPEERRTFDLVTHNRTYHFQAEDEQECMIWVSVLQNSKEEALNTALGGDQ
LQFPDSGLQELARAVITELRRMPGNEACADCGAHDPTWLSTNLGILTCIECSGIHRELGV
HYSRIQSLTLDMLSTSELLLAVSIGNTRFNDIMEASLPNDSIKPLPQSDMNARKEYIVAK
YAERRYVLRRDREESEPWRVYDAVRSRDLTALLQLYAMGEDLAKPLAQPEGQDLRETALH
LAVRLEDRSSLALVDFLIQNSVCLEKKTREGNTALHYSAQHHKTECLKLLLKGKAVLHTV
NSSGETALDIARRLQHSQCVELLELAQSGKFNSQIHVEYMWETQSQDLYDSEDELDERLS
LVPRNLRSSLPYNGGVGASPSRWSFANAPVACKTYENVDFLYRNPPANSAPSGVLKPPPP
LPAKAIMRGRSDPQISVSTQEGGRKSPRRCCSNPAPQSSPPSPMLEGQTQGGRPPRSPHG
QGGQVRGQRPTAAWEVQANSGSWSGALDSSTKSSSPQNHIGPVSSEKTTSYRRTNSGGQG
KGSTAVTSPSCVALGSQEELYCSFVTNDSAPGATPSATPTTSPITVPAPRPRRNAMVSKS
RPTQKKVKALVDCRAVSSDQLAFFKDEVIVVTATEDPHWWVGHIEGYPSRSGTFPVNYVH
KLGD
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagttggacctttttacttggagagcaacatgccggagcatatcagcatttcg
gactttgttgctctgacaaacgaggatttggcatcaccgactacctcgatttttcagtcc
aaaatgagtgaatgtcggaacactgtttcggcagtcgaagagtcaatggatatggaccag
aacaccttacagaggatgaagaagatggtcaaggctattcacagctctggaatcagtcac
gcagagaacaaggagcagtacatcgacgtgctggagaacctggggaacagtcacctgacc
caggacaacaacgaggtgtccactgggttcctgaacctggctgtcttcaccagggaggtc
accgcactcttcaagaacctggtccagaacctgaacaacataatctccttccccctggag
aacatcctgaagagtgagctcagagacagcagactggagctgaagaaacagttggagaag
agctggaaggactatgacatcaaagttgggaaactggagaaggagaggagggagaagagt
cggcagctgggcctgaccaagactgagggacacaacgtgacggaggacatggagcgagag
aggaggaccttccagctgcagatgtgtgagtatttgctaaagatccaggaactgaaggtg
cgccagggtccagacctgctccagagtctcatcaagtacttccaggcccagctcaatttc
ttccaggacggcttgaaagctgccgagaaccttagtccttttgtggagaagctggcgtca
tctgtccacacggtgcgacaggaccaggatgaggaagtgagacagctctctcagctacga
gattcccttaggctgctgctacaggtggagggaaaagaagaatacctgaacagaaagaac
tcgggtaacggatacagcatacaccaacctcaaggcaacaagaagtacggcacagagaag
tcaggcttcctacagaagaggagtgacgggattaggaaggtgtggcagaagaggaagtgc
ggagtcaagtacggctgtctgaccatctcccacagcacgataaaccgaccaccggctaag
ctcaaccttctgacctgtctggtgcgtcccaaccccgaggagaggaggacctttgacctg
gtcacacacaatcggacctaccatttccaagccgaggacgagcaggaatgcatgatttgg
gtgtcagtgctgcagaacagtaaggaggaagccctgaacacggcgttgggcggcgaccag
ctgcagttcccggactccgggctgcaagagctggccagggccgtcatcaccgaactcaga
cgcatgcccggcaacgaggcctgcgcagactgtggagcccacgatcctacctggctctcc
actaacctgggcatcctgacgtgcatagagtgttctgggatccacagggagttgggagtc
cattactccaggatccagtccctcacactggacatgctaagcacctcagaactactgctg
gcggtcagtataggcaacacacggttcaatgacatcatggaggccagtcttcccaatgat
tccatcaaacctctaccccagagtgacatgaatgccaggaaggagtacattgtggctaag
tatgccgagcggcgctacgtgctgcgcagggacagggaggagagtgagccgtggcgtgtg
tatgatgccgtgaggagccgggacctcaccgccctgctgcagttatacgccatgggagag
gacctggccaaaccgttagcacagcctgaaggacaggacctgagagagaccgctcttcac
ttggctgtcaggctggaggacaggagttctctagccctggtggacttcctcattcagaac
agtgtctgtctagagaagaagactcgagaggggaacactgctctacattacagcgcccag
caccacaaaacagagtgcctcaaactactcctcaaaggaaaggctgtcctccacacagtg
aactcatcaggagagacggccctggacatcgccaggagactgcagcactcccagtgtgta
gaactgctggagctggcccagagtgggaagttcaacagtcagatccatgtggagtacatg
tgggagacgcagagccaggacctgtacgacagcgaagatgaactggatgagaggctgagc
ctcgtacccaggaacctgcgctcgtctctgccttataacgggggcgtgggcgcctcgccc
tcccgctggagcttcgccaacgcccctgtggcgtgtaagacctacgaaaatgtggacttc
ttgtaccgtaacccccccgccaacagtgccccatctggcgtcctcaagcccccaccgccg
ctgcctgctaaagccatcatgagaggccgctcggacccccagatatccgtgtccacccag
gaggggggccgcaaatccccccggcgctgctgctctaaccctgccccccagtccagcccc
ccctcccccatgttggagggtcagacccagggggggcggccacccagatcaccccacggc
caggggggtcaggtgaggggacagagaccgaccgcagcatgggaggttcaggctaatagt
ggctcatggtctggggccttagacagcagcaccaagtccagctcccctcagaaccacata
ggacccgtcagctcagagaagacgacgtcgtacaggaggaccaatagcggaggacaaggg
aagggttctacagccgtgacctctcccagctgtgtggcacttggcagtcaggaggagctg
tactgcagcttcgtgactaatgactccgcccccggcgccacaccttcagccacacccacc
acctcgcccatcactgtacccgccccgcgccctcgcagaaatgccatggtatctaagagc
cggccgacacagaagaaggtaaaggcgctggtggactgcagagctgtcagctcggaccag
ctggccttcttcaaggatgaggtcatcgtagtcacagccaccgaggacccccactggtgg
gtcggccacatcgagggctatccatccagaagtgggactttccctgtgaactatgtccat
aaactaggggactga
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