Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383676
Help
Entry
139383676 CDS
T10872
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139383676
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
139383676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
139383676
NCBI-ProteinID:
XP_070984310
LinkDB
All DBs
Position
25:complement(22822801..22885551)
Genome browser
AA seq
668 aa
AA seq
DB search
MSSRVCKNCGGTDIDVDQARGDAVCVGCGSVLEDNIIVSEVQFMETGGGGSSAVGQFVAG
DASGRNPTFGEGLYTGVGRESRAQTLQNGRRQINTLGHQLQLNQHCLDTAFNFYKMAVCK
RLTRGRRVAHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGRTFLVLARELCINAPA
IDPCLYIPRFAHMLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTIKEIISVVKVCEATLRKRLNEFEDTPTSQLTIEEFMKVDLDQECDPPSFIAGQRK
KRMKLLEEELEKKIDDVQGEIHEYQDEIEMELEQSRPKLRGMYASYAKPGPQEEEDDEIS
LPDGEDEELKAVAQHLNKELCDQVISGEEDGDGQEERPPRRGPSLASLLGPMPTAASLGL
PESISKCIGEEKENDEDAENGELDLSGIDDDEIELYLLNDKEVKIKTELWLKQNEDYLKE
QKEKEERIAKEKELGIYKDKKPKTSKKRAPIHANTADEAIEKMLEQKKISTKINYDILKE
LNVKPCASPARQTAESPKGATPGAQRLTGRYRKPTNVPLSLGTPLSSLGKRLRPFISGHP
PKKLALDQIAIPLPVASEVSPHSVLVESGPVVYDDVADEEEEDEEEPCVSAMELLGGNEY
GCDDDDGF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagagtgtgtaagaactgtgggggcacagacatcgatgtggaccaggccaga
ggcgatgcggtgtgtgtgggctgtggctcggtcctggaggacaacattatcgtgtccgag
gtccagttcatggagacaggagggggcggctcctctgctgtgggacagtttgtagctgga
gatgcctctggaaggaaccccacttttggggaagggctctatacgggcgttggaagggag
tcccgggcccagaccctgcagaacgggagacgtcagatcaacacactgggccaccagctg
cagctgaaccagcactgcctggacacggccttcaacttctacaagatggccgtgtgtaaa
cgcctgacacggggccgaagggtggcccacgtggtggccgcatgcctctacctggtctgc
aggacggaaggaacacctcacatgctgcttgacctcagtgacctcctgcaggtaaatgtt
tacgtcctgggtagaaccttcctggtcctggccagagagctctgcatcaatgcccccgcc
atagacccctgcctgtacatccctcgctttgcccacatgctggagtttggagagaagaac
catgaggtgtccatgacagcactgcgactgctgcagaggatgaaaagggactggatgcac
acaggacggagaccctcaggactgtgtggcgcagccctgttggtcgctgctcgcatgcac
gagttccgccgtaccatcaaagaaatcattagtgtagtgaaggtgtgcgaggccacacta
cgaaagagattgaatgagtttgaggacacgcccaccagccagctgaccattgaggaattt
atgaaagtggatcttgaccaggagtgtgacccgccctctttcatcgctggccagaggaag
aaaagaatgaagctgcttgaggaagaattggagaagaagattgatgatgttcaaggtgaa
atccatgagtaccaagatgagattgagatggagctggagcagagccggcccaagttgaga
gggatgtacgcctcctatgcaaaacccggcccccaggaggaagaggacgatgaaatatct
cttcctgatggggaggacgaggagctaaaggctgtggcccagcacctcaataaggagctg
tgtgaccaggtgatctctggagaggaggatggagacgggcaggaggagagacctccacgc
agaggcccatcactggcctccctcctggggcccatgcccaccgcagccagcctcggcctc
ccagagtctatcagcaagtgcatcggagaggagaaggagaacgatgaggatgctgaaaat
ggagagctggacttgagtggtattgatgatgatgagattgagctgtatctcctgaatgac
aaagaggtgaaaatcaagactgagctttggctgaaacagaatgaagactacttgaaagag
cagaaagaaaaggaagagcggatagcgaaagagaaggagctggggatttacaaggacaag
aagcccaagacctccaagaagcgggctccgatccatgccaacacagccgacgaggccata
gagaagatgctggagcagaagaagatctccactaagatcaactacgatatcctgaaggag
ctgaatgtcaagccatgcgccagtccagcccgccagacagcagagtctccgaaaggagcc
acccctggagcccagaggctgactggacgataccgcaaacccaccaatgtccctctgagc
ctgggcacaccactcagcagcctgggcaagaggttacggcccttcatatcaggacacccc
cctaagaagctggctctagaccagatagccatccccctgccagtggcctctgaggtgtcg
ccccactctgtgctggtcgagagtgggcctgtggtctatgacgatgtggcagatgaggaa
gaggaggatgaggaggagccctgcgtcagcgccatggagctgctgggaggcaacgagtat
ggatgtgatgatgatgatggtttctag
DBGET
integrated database retrieval system
