Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383713
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Entry
139383713 CDS
T10872
Name
(RefSeq) frizzled-3-like isoform X1
KO
K02329
frizzled 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04150
mTOR signaling pathway
ocla04310
Wnt signaling pathway
ocla04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139383713
04150 mTOR signaling pathway
139383713
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
139383713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139383713
G protein-coupled receptors [BR:
ocla04030
]
Frizzled / Smoothened family
139383713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
139383713
NCBI-ProteinID:
XP_070984368
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All DBs
Position
25:12261532..12298317
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AA seq
708 aa
AA seq
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MSVRWDSHRDRVMSRSLFLLFLWSLCSPCLSIHAETAESHSTFTCEPIGLRMCQDLPYNT
TFMPNLLNHYDQQTAALAMEPFHPMVNLQCSEGLRMFLCALYAPVCIEYGRVSMPCRALC
HRAKRDCHKLMEMFGVTWPDEIECSRFPDCDEAYPRAVDLQTSVDPTDISPISIQRDYGF
WCPRELKMEPDLGYSFLGTRDCSAPCPNMYFQRSELTFARYFIGVVSIVCLSATLFTFLT
FLIDVTRFRYPERPIIFYAICYMMVSLVFFLGFLLEDRVACNAANPAQYRASTVTQGSHN
KVCSLFFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKALLFHTCAWGLPGCLT
VALLALNKIEGDGVSGVCFVGLYDVTALRWFLLAPLCLNVAVGVSLLLVGIVALNRVRME
IPLEKENQDKLVKFMIRIGVFSVLYLVPLLTVISCYLYENSNRAVWEITWVQERCRDYHI
PCPYQVEQTSHPELTLFLIKYMMMLVVGIPSVFWVGSKKTCFEWASFLQGRRRKDGVNES
RQVLQEPDFAQSLLRDPHTPIIRKSRGTSTQGTSTHASSTHLAILEEPDDPRHAPDDRGP
IHSLGHASSTRSKAGSVHSKTSYHGSLHRSRDGRYTPCSYRGGEEQTIPPHSSMPHLDHP
LSTHSSLHRLESQSRHSSQRDLVVASPTRITHGTSGGRVANDDDGASA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaggtgggactcacacagagacagggtcatgtctaggtcactcttcctcctc
ttcctctggtctctctgctcaccctgtctgtctatccatgcggagacagcagagagccac
agtacgtttacctgtgagccaataggactacggatgtgccaggacctgccttacaacacc
accttcatgcccaacctcctcaaccactacgaccagcagacggccgcgctcgccatggag
cccttccaccccatggtgaacctgcagtgttcggagggcctgaggatgttcctgtgtgcc
ctctacgctccagtctgtatagagtatggccgcgtgtccatgccctgccgagccctgtgc
caccgcgccaagagggactgccacaaactcatggagatgttcggtgtgacctggccagac
gagatagagtgtagcaggttcccagactgtgacgaggcctacccccgtgctgtggacctg
cagaccagcgtggacccaacagacatctctcccatctccatccagagggactacggcttc
tggtgcccccgcgagctcaagatggagccagacctgggctactcgttcctgggcacgcgt
gactgctcggccccctgccccaacatgtacttccagcgctcggagctcaccttcgcccgc
tacttcatcggcgtggtgtctatcgtgtgtctctcggcaacgctcttcaccttcctcacg
ttcctcatcgatgtcacgaggtttcgctaccccgagcggccaatcatcttctacgccatc
tgctacatgatggtgtcactggtcttctttctgggcttcctattggaggacagggtggca
tgcaatgcggcgaaccccgcccagtaccgggcgtccaccgtcacgcagggctcacacaac
aaggtgtgctctctgttctttatggtgctgtatttcttcaccatggctggcagtgtgtgg
tgggtcatcctcaccatcacctggttcctggcggccgttcccaaatggggcagcgaggcc
atcgagaagaaggccctgctcttccacacctgcgcttggggcctgcccggctgcctcacc
gtggccctgctggccctcaacaagattgagggcgacggtgtgagtggggtgtgcttcgta
ggcctctatgacgtcacagcgctgcgctggttcctgctagcaccgctctgcctcaacgtg
gcggtgggtgtatctctgttactggtgggcatcgtggcgctgaaccgtgtgcgtatggag
atccctctggagaaggagaaccaggacaagctggtgaagtttatgatccgtatcggggtt
ttctctgtgctctacctggtacctctgctcacggtgatatcctgctacctgtatgaaaac
agcaacagggctgtctgggagatcacctgggtccaggagcgctgcagggactaccacata
ccctgtccctaccaggttgagcagaccagtcacccagagctgaccctgttcctcattaag
tacatgatgatgctggtggtggggattccttcggttttctgggtgggcagcaagaagacc
tgcttcgaatgggccagcttcctacaaggacgcagacgcaaagatggggtgaatgagagc
agacaggtgctccaggagccagactttgcccaatctctactgagagacccccacaccccc
atcatcaggaaatcacggggaacctccacccagggcacctccacccacgcctcttccact
catctggccattctggaagagcctgatgaccctagacacgcccccgacgaccgtggacca
atccactctctgggccacgcctcctccacccgcagcaaggctggcagtgtgcacagcaag
accagttaccatggcagcctgcatcgctcccgagatggacgctacaccccctgtagttac
agaggcggcgaggagcaaacaatacccccccacagcagcatgcctcacctcgaccatccg
ctgtccactcacagcagcctccaccgactggaatcccaatcacggcacagtagccagcgt
gatctcgtcgttgcctcacccacccgtatcacccacgggacgagcggtggccgcgttgct
aatgatgacgatggagccagcgcctga
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