Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383722
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Entry
139383722 CDS
T10872
Name
(RefSeq) hepatocyte nuclear factor 3-beta
KO
K08035
forkhead box protein A2, hepatocyte nuclear factor 3-beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139383722
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
139383722
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
HNF_C
Forkhead_N
Motif
Other DBs
NCBI-GeneID:
139383722
NCBI-ProteinID:
XP_070984379
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All DBs
Position
25:14942391..14944923
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AA seq
417 aa
AA seq
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MMLGAVKMEGHEHTDWSTYYGEPECYTSVGNMNTGLGMNSMNTYMSMSGMSTTANMTANP
MNMSYVNTAMSPSMTGMSPGTGAMNGMGAGMTAMSATLSPSMSPMTAQPPSMNSLTSYAN
MNAMSPMYGQSSINRSRDPKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLAEVYQWI
MDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYL
RRQKRFKCDGQKKMCKESGRKTSEGGSNSSSESCNGNESPHSNSSPNDHKRSLSDMKSIQ
ALSPEHAASPVSHSQVHGHLMSQHHSVLAHEAHMKPEHHYSFNHPFSINNLMSSEQQHHK
MDLKTYEQVMHYSGYGSPMAGALSMGSMGKVGLDSSSIPADASYYHGVYSRPIMNSS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttggagcagttaaaatggaaggacacgaacacacagactggagcacctactac
ggagagcccgagtgttacacctcggttggcaacatgaacacaggcctgggcatgaactca
atgaacacctacatgagcatgtcgggcatgagcaccacggccaacatgacagccaacccc
atgaacatgtcctatgtcaacacggccatgagtccctcgatgaccggaatgtcaccgggc
accggggccatgaacggcatgggcgctggcatgacagccatgagcgccacgctcagcccc
agcatgagccccatgaccgcgcagcctccgtccatgaactcccttacgtcctacgccaac
atgaacgccatgagccccatgtatggacagtccagcatcaacagatctagggacccgaaa
acataccggaggagctacactcacgccaagcccccgtactcttacatttctctcatcact
atggctatccaacagtcccccagcaagatgctgacgctggccgaggtctatcagtggatc
atggatcttttcccgttttaccgacagaaccagcaacgctggcagaactcaattcgccat
tctctatcgttcaatgattgtttcctcaaagtgcctagatctccggataagcccggtaag
ggctcgttttggaccctccaccccgattccgggaacatgttcgagaacggctgctatctg
aggaggcagaagcggtttaagtgtgacggccaaaagaagatgtgcaaggagtcaggaagg
aagacatccgagggcggctcgaacagcagctcggagagttgcaacggcaacgagtccccc
cattccaactcctcccccaacgatcacaaaaggtctctgtcagacatgaagtcgatccag
gctctgagtccggagcacgccgcctcaccggtgtcccactcccaggtgcatgggcacctc
atgtcccagcatcactcggtcctcgcacacgaagcgcacatgaaacccgagcatcactac
tcgttcaaccaccccttctccatcaacaacctcatgtcttcggagcaacagcatcacaaa
atggacctaaagacttacgagcaggtgatgcactattccggctacggttcccccatggcc
ggggcgctatccatgggttcgatgggaaaagtgggtttagattcctcgtcaatacccgct
gacgcatcttactatcacggtgtctactccaggcctattatgaactcctcataa
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