Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383737
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Entry
139383737 CDS
T10872
Name
(RefSeq) paired box protein Pax-1-like
KO
K09382
paired box protein 1/9
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139383737
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139383737
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_SB
Motif
Other DBs
NCBI-GeneID:
139383737
NCBI-ProteinID:
XP_070984396
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All DBs
Position
25:complement(15125671..15130342)
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AA seq
355 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIRDYKLGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQTPTQAGLSYNHIYPYSYPNAMSPNGKMGSGPGVPV
AAGHVSISRAWPSAHTVTNILGIRAFMDHQAIAGAEGYPPKMEDWSSVNRATFPSAHAVN
GIDKSVIDADIKYAQPSSTLSSYVPACSYSSSNQYGVYSGPGSYVTPGHHWQSQNSSLSL
PSSGMTMHAGDIHSSMAFKHPSREGDRKPTSPLSKQQQHEALSSVHGLNLPTSSS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggggaggtgaatcagttgggtggtgtattcgtcaatggacgaccg
ctgcccaacgccatacgactacggatagtggaattggcccagcttggaatcagaccctgc
gatatcagtaggcaacttcgtgtctctcatggctgtgtgagcaagatactagcacgatac
aatgaaacgggttctattttacccggtgccatcggggggagcaaaccacgggttactaca
ccgaatgtggtgaagaacataagggattacaaactaggtgacccggggatctttgcctgg
gagatccgggacaggcttctcgcagacggagtttgtgacaaatacaacgtgccctcagta
agctccatcagcaggattttacggaacaagattggaaatctttcccagccgaaccagtat
gagagcagcaagcaaacccccacacaggccggcctctcttacaaccacatatacccctat
tcataccccaacgctatgtcacccaatggcaaaatgggcagcggtcccggagtacccgtg
gcggccgggcatgtaagcatatcaagggcctggccatcagcacacactgtcaccaacatt
ctgggtatcagggccttcatggatcatcaagctattgctggagcagagggatatccaccg
aaaatggaggactggagtagtgtcaacagagcgacgtttccctctgctcatgcagtcaac
ggaattgacaaatcagtcattgatgcggacataaaatatgcacagccttcatcaacatta
tccagttatgtcccagcttgttcctactcatcttcgaaccagtacggcgtttatagtggg
ccaggtagctatgtgacccctggacaccattggcagtcccagaactcgagtttgtccctc
ccaagcagcggcatgacgatgcacgcgggagacatacactcttcaatggcgttcaaacat
ccatcgcgagaaggagacagaaagcccaccagtccactaagcaagcagcagcagcacgag
gcgttgagcagtgtacacggactcaatctccctacctcatcctcttaa
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