Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383844
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Entry
139383844 CDS
T10872
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139383844
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139383844
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139383844
NCBI-ProteinID:
XP_070984521
LinkDB
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Position
25:complement(36305320..36350284)
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AA seq
1199 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSGTASPQPGTNQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGAVRLFGRAGVECYCQHDSGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNHDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRSCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLEQIGYPIFENPYPLSIHESPVTCVEYFADCPPELIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
APKGGKEEKPSTEIVDEDPFAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEMTTEVVQL
LEVRMQGELNDVDSPDPAGDHPPTPSTPVPPSSSSPTQEGEPPEAQPFTSDDRPRDNVPG
LKVWSAPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVSSSDGLVVFGNSSGLAVVDYLQ
KSLLLNMSTSELYSPSDPYQRQPRSPRKTRQPSGDKDIPPVTSCMSRLSIFYTSMKKTYH
SSNSPLSDNSDGNNISEEKSSKSPTSGSTTPTNSDDEHKQKRFIEMVKSKSRRFSKTVAN
DFAKMSKKISSPTEQKTGLDAKDSSFSRSRSSSVTSIERESREAISSFHFSESFPRKSDS
SPSPSLWLGTTQGTVLVLSLSLPPTGDQRLQQPVGVSSCGTLVRLKGGILTMAFLDSLGA
VLPPSYEPWSEPSAPDEEKTRRRRPASPPPTQDGQDSQYAVVCSEKQAKVVGLPSQSCFF
KHNITESSFVLRADVVQMAAGLCLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIART
FCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPLETPEAPNRGFFKGLFGGG
AQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLARARIALDERGQKL
GELEDRTAAMMASADSFSKHAHDVRPMLYQVICEVQTWVQLVFVSPKYFHCLIEPASSA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatcagaaaagtgctggacggcttgactgcttcttcctctggcact
gcatctccacaaccaggaactaatcaaaacgatgtgatccaagagacgctacaatcggag
catttccagctctgcaagactgtgcgccatggctttccctaccagccctcctccatggcc
tttgaccctgtgcaaaaaattctggccatcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcagcatgacagtggtgcagctgtaatccagctt
cagtttctggtcaacgagggggcgctggtgagtgccttagctgatgacagcgttcacctg
tggaacctgaggcagaagcagccagctatcctgcacactctgaaattcaatcgggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacatcggcacagagaaagga
aacatccacatcgtcaacgtggagtccttcacactgtcaggctacgtcattatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cccatggatgagggaaagattttgattggatttgaatgtgggaccgtggtgttgtgggat
ctgaaatgcaaaaaagctgactaccgctacaatcatgatgaggccatccactcagtagcc
tggcaccatgagggaaaacagttcacctgcagccactcagatggaactctgaccacatgg
aacgtacgtgtccccgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatcctcaaagtggagtataaaacgactaga
gctggggacgccttcgtggtcatgtctggaggcctgtcctatgacacggggtgcaggagg
tcctgtctgacggtgatgcatgggaagagtactgctgtcctggagatggactatcccatc
gtagacttcctcacgctctgcgaaacaccatatcctaatgatttccaggagccttatgct
gtagttgtcctcttggaaaaggatttagttgtcatcgaccttgaacaaattgggtaccca
atatttgagaacccgtaccctctgtcgatccacgagtctccagtgacgtgcgtggagtac
tttgctgactgccctcctgaactcatacctgcactttactctgtgggctcccggcaaaag
agacagggttacagtaagaaggaatggcctataagtggtggtaactggggccaaggcaca
ctgagctaccccgagatcatcgtcactggacatgctgacggatcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctccaaagggcggtaaggaagagaagccgagcacagagatagtggatgaggatcccttt
gccatccagactttgtcgtggtgcccagagagcagaatgctgtgtgtggccggagtctcc
gcccacgtcatcatctataggttcagcaaacaggaaatgaccacagaggtggtgcagctg
ttggaggtgcgtatgcagggtgagctgaacgatgtggattctccagacccagcaggagac
catcctcccaccccatctaccccagtacccccctcctcctccagccctacccaggaggga
gagccccctgaggcccagcccttcacctctgatgaccggcccagggataacgtaccaggc
cttaaggtctggagcgcccctctgaagcagtctcctggttaccaggtggagctggtcatt
caactggtctgggttagtggggagccgccgcagcagatcaccagcctggccgtcagctcg
tcagacggacttgtggtgtttggcaacagcagcggtctggctgtcgtggactaccttcag
aagagcctcctcctgaacatgagcacgtcagagctgtacagtccctcagacccctaccag
agacagcctcggtcgcctcgcaagacacgccagccatctggagacaaagacattccgcct
gtgacatcttgcatgtcccgcctttctatattttatacgtctatgaaaaagacctatcat
tcttctaactcccctctcagtgataacagcgatggaaacaacatttcagaggagaaaagc
agcaaatcaccaacgtcaggctctacgacacccaccaattcagacgatgaacacaaacag
aaaaggtttatagaaatggtgaagtccaaaagcaggcgcttttccaagacggttgccaat
gactttgccaagatgtcaaagaaaattagctcacctacagagcaaaagacaggcctggat
gccaaggacagttcgttcagccgctcgaggagttccagtgtgaccagtatagagcgggag
tcccgcgaagccatctcctccttccacttcagtgagagtttccccaggaagtcggacagc
agccccagccccagcctgtggttgggtactacccagggcactgtcctggtcctctccctc
agcctgccacctacaggggaccagaggctgcagcaacctgttggagtctcttcctgtggt
actctggtcagactaaaaggaggtatcctgactatggccttcctggactcccttggggcg
gtcctacccccttcctacgagccgtggtccgagcccagcgctccagacgaggagaagacg
aggaggcgcaggccggcctccccaccccccacccaggacggtcaggacagccagtacgct
gtggtgtgctcagagaaacaggccaaggtggtgggtctgccctcccagtcctgcttcttc
aaacacaacatcacagagagctccttcgtgctgagagctgacgtggtgcagatggccgct
ggactctgcctcgcctgcttctgtgctaatggacacatcatgactctgagtctacccagt
ctcagaccactcctggatgtgaactaccttcccctgacagacatgaggatagcccggacc
ttttgcttctccaacctgggccaggccatgtacctcacctcccccaccgagatacagagg
atcacatacagccaggagacctgcgacaatctgcaggagatgatgggagagctgtttaca
ccgttagagacacctgaagctcctaatagaggtttcttcaagggcctgtttgggggagga
gctcagtcgctggatagagaagacctgtttggtgagactgcggcgggtaaggcatctcgt
agcctggcgcagcacatccccgggccccagggcatggagggtatgaagggagcagcctct
ggggtggtgggggacctggcccgtgccaggatagccctggatgagagggggcagaaactg
ggcgagctggaggacagaaccgcagccatgatggccagcgctgactccttctctaaacac
gctcatgatgtaaggccaatgctctaccaggtcatctgtgaggtgcaaacctgggttcaa
ctagtattcgtttcccccaaatactttcattgtttgattgagcctgcctcgagtgcatga
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