Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383844
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Entry
139383844 CDS
T10872
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139383844
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139383844
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
139383844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
Beta-prop_HPS5
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_EML
PEP5_VPS11_N
WD40_like
KNTC1_N
Synaptobrevin
RAB3GAP2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
139383844
NCBI-ProteinID:
XP_070984521
LinkDB
All DBs
Position
25:complement(36305320..36350284)
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AA seq
1199 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSGTASPQPGTNQNDVIQETLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAIGTQSGAVRLFGRAGVECYCQHDSGAAVIQLQFLVNEGALVSALADDSVHL
WNLRQKQPAILHTLKFNRERITFCHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMWN
KAIELSSKSHPGPVVHISDNPMDEGKILIGFECGTVVLWDLKCKKADYRYNHDEAIHSVA
WHHEGKQFTCSHSDGTLTTWNVRVPAKPTITITPHGKQPKDGKKPEPCKPILKVEYKTTR
AGDAFVVMSGGLSYDTGCRRSCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLEQIGYPIFENPYPLSIHESPVTCVEYFADCPPELIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTLSYPEIIVTGHADGSIKFWDASAIMLQVLYKLKTAKVFEK
APKGGKEEKPSTEIVDEDPFAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEMTTEVVQL
LEVRMQGELNDVDSPDPAGDHPPTPSTPVPPSSSSPTQEGEPPEAQPFTSDDRPRDNVPG
LKVWSAPLKQSPGYQVELVIQLVWVSGEPPQQITSLAVSSSDGLVVFGNSSGLAVVDYLQ
KSLLLNMSTSELYSPSDPYQRQPRSPRKTRQPSGDKDIPPVTSCMSRLSIFYTSMKKTYH
SSNSPLSDNSDGNNISEEKSSKSPTSGSTTPTNSDDEHKQKRFIEMVKSKSRRFSKTVAN
DFAKMSKKISSPTEQKTGLDAKDSSFSRSRSSSVTSIERESREAISSFHFSESFPRKSDS
SPSPSLWLGTTQGTVLVLSLSLPPTGDQRLQQPVGVSSCGTLVRLKGGILTMAFLDSLGA
VLPPSYEPWSEPSAPDEEKTRRRRPASPPPTQDGQDSQYAVVCSEKQAKVVGLPSQSCFF
KHNITESSFVLRADVVQMAAGLCLACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIART
FCFSNLGQAMYLTSPTEIQRITYSQETCDNLQEMMGELFTPLETPEAPNRGFFKGLFGGG
AQSLDREDLFGETAAGKASRSLAQHIPGPQGMEGMKGAASGVVGDLARARIALDERGQKL
GELEDRTAAMMASADSFSKHAHDVRPMLYQVICEVQTWVQLVFVSPKYFHCLIEPASSA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaatatcagaaaagtgctggacggcttgactgcttcttcctctggcact
gcatctccacaaccaggaactaatcaaaacgatgtgatccaagagacgctacaatcggag
catttccagctctgcaagactgtgcgccatggctttccctaccagccctcctccatggcc
tttgaccctgtgcaaaaaattctggccatcgggactcagagcggagctgtgagacttttt
ggccgtgcgggtgtggagtgttactgtcagcatgacagtggtgcagctgtaatccagctt
cagtttctggtcaacgagggggcgctggtgagtgccttagctgatgacagcgttcacctg
tggaacctgaggcagaagcagccagctatcctgcacactctgaaattcaatcgggagagg
atcacgttttgtcacctgcccttccagagtaaatggctgtacatcggcacagagaaagga
aacatccacatcgtcaacgtggagtccttcacactgtcaggctacgtcattatgtggaac
aaagccatcgaactgtcctccaagtcacaccctgggcctgtggtccacatcagtgataac
cccatggatgagggaaagattttgattggatttgaatgtgggaccgtggtgttgtgggat
ctgaaatgcaaaaaagctgactaccgctacaatcatgatgaggccatccactcagtagcc
tggcaccatgagggaaaacagttcacctgcagccactcagatggaactctgaccacatgg
aacgtacgtgtccccgccaagcctacaatcaccatcacaccacacggtaagcagcccaag
gatggaaagaagccagaaccatgtaaacctatcctcaaagtggagtataaaacgactaga
gctggggacgccttcgtggtcatgtctggaggcctgtcctatgacacggggtgcaggagg
tcctgtctgacggtgatgcatgggaagagtactgctgtcctggagatggactatcccatc
gtagacttcctcacgctctgcgaaacaccatatcctaatgatttccaggagccttatgct
gtagttgtcctcttggaaaaggatttagttgtcatcgaccttgaacaaattgggtaccca
atatttgagaacccgtaccctctgtcgatccacgagtctccagtgacgtgcgtggagtac
tttgctgactgccctcctgaactcatacctgcactttactctgtgggctcccggcaaaag
agacagggttacagtaagaaggaatggcctataagtggtggtaactggggccaaggcaca
ctgagctaccccgagatcatcgtcactggacatgctgacggatcaatcaagttttgggat
gcttctgcaataatgctccaagtactgtacaagctgaagactgccaaggtgtttgagaag
gctccaaagggcggtaaggaagagaagccgagcacagagatagtggatgaggatcccttt
gccatccagactttgtcgtggtgcccagagagcagaatgctgtgtgtggccggagtctcc
gcccacgtcatcatctataggttcagcaaacaggaaatgaccacagaggtggtgcagctg
ttggaggtgcgtatgcagggtgagctgaacgatgtggattctccagacccagcaggagac
catcctcccaccccatctaccccagtacccccctcctcctccagccctacccaggaggga
gagccccctgaggcccagcccttcacctctgatgaccggcccagggataacgtaccaggc
cttaaggtctggagcgcccctctgaagcagtctcctggttaccaggtggagctggtcatt
caactggtctgggttagtggggagccgccgcagcagatcaccagcctggccgtcagctcg
tcagacggacttgtggtgtttggcaacagcagcggtctggctgtcgtggactaccttcag
aagagcctcctcctgaacatgagcacgtcagagctgtacagtccctcagacccctaccag
agacagcctcggtcgcctcgcaagacacgccagccatctggagacaaagacattccgcct
gtgacatcttgcatgtcccgcctttctatattttatacgtctatgaaaaagacctatcat
tcttctaactcccctctcagtgataacagcgatggaaacaacatttcagaggagaaaagc
agcaaatcaccaacgtcaggctctacgacacccaccaattcagacgatgaacacaaacag
aaaaggtttatagaaatggtgaagtccaaaagcaggcgcttttccaagacggttgccaat
gactttgccaagatgtcaaagaaaattagctcacctacagagcaaaagacaggcctggat
gccaaggacagttcgttcagccgctcgaggagttccagtgtgaccagtatagagcgggag
tcccgcgaagccatctcctccttccacttcagtgagagtttccccaggaagtcggacagc
agccccagccccagcctgtggttgggtactacccagggcactgtcctggtcctctccctc
agcctgccacctacaggggaccagaggctgcagcaacctgttggagtctcttcctgtggt
actctggtcagactaaaaggaggtatcctgactatggccttcctggactcccttggggcg
gtcctacccccttcctacgagccgtggtccgagcccagcgctccagacgaggagaagacg
aggaggcgcaggccggcctccccaccccccacccaggacggtcaggacagccagtacgct
gtggtgtgctcagagaaacaggccaaggtggtgggtctgccctcccagtcctgcttcttc
aaacacaacatcacagagagctccttcgtgctgagagctgacgtggtgcagatggccgct
ggactctgcctcgcctgcttctgtgctaatggacacatcatgactctgagtctacccagt
ctcagaccactcctggatgtgaactaccttcccctgacagacatgaggatagcccggacc
ttttgcttctccaacctgggccaggccatgtacctcacctcccccaccgagatacagagg
atcacatacagccaggagacctgcgacaatctgcaggagatgatgggagagctgtttaca
ccgttagagacacctgaagctcctaatagaggtttcttcaagggcctgtttgggggagga
gctcagtcgctggatagagaagacctgtttggtgagactgcggcgggtaaggcatctcgt
agcctggcgcagcacatccccgggccccagggcatggagggtatgaagggagcagcctct
ggggtggtgggggacctggcccgtgccaggatagccctggatgagagggggcagaaactg
ggcgagctggaggacagaaccgcagccatgatggccagcgctgactccttctctaaacac
gctcatgatgtaaggccaatgctctaccaggtcatctgtgaggtgcaaacctgggttcaa
ctagtattcgtttcccccaaatactttcattgtttgattgagcctgcctcgagtgcatga
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