Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383917
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Entry
139383917 CDS
T10872
Name
(RefSeq) tubby-related protein 4-like isoform X1
KO
K24720
tubby-related protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
Tubby family proteins
139383917
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139383917
NCBI-ProteinID:
XP_070984627
LinkDB
All DBs
Position
25:complement(35926295..35939257)
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AA seq
1935 aa
AA seq
DB search
MSRNCEPGHSVRMLAAVEHGPILCSDSNILCLSWKGRVPKSEKDKPVCQRRYYEEGWLAT
GNGRGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIFV
WIQYEGRWSVELVNDRGAQVSDFTWSHDGSQALIAYRDGFVLVGSVSGQRHWSSEINLES
QITCGIWTPDDQQVLFGTADGQVIVMDCHGRMIAHVLLHESDGIVGMSWNCPCFLVEDST
ESDTDSDDNNPPQVRNLKPLLTVSFISGDISLMNNYDDLAPTVIRSGLKDVEVQWCSQGD
LLAVAGMERHGVPGLPSDSIMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSRLF
LACGPALYVVRVEHRVASLQLLCQQGIASALREERDVGKLNMPSLLCSYVTTAFIPTIKP
PIPDPNNIRDFVSYPTAGNERLHCTMKRAEDNPEAGGPCYTLYLEHLGGLVPILKGRRIS
KLRPEFIIMDPKTDSKAGGLGTGKDEVCVNAMISYMTDSCNCSDSSDIELSDEWVGKKSP
KLSRGNRSPKHSRRNMESRKSPKTSRTSQEGLRSPRLPTKKPLIRSPSLTRREMSMDGIS
EHNYLAQVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRRISLD
FMSLPVFNPNVFSEDEDDLPVTGPSGVTGDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQ
SLLANQNIQLDVLTNPTATASAAAAAAAAAASASVLGSDHGQDAVAVHYSGTLGRYSNPG
QVIFNGLEMGPLLAGTLPPPPPPHNLPQQPHQQRPQLQQTHQQQQSKQPQQIQTQQQQQQ
QQQQRMQHQQLQHQQPQISQHQQLQHKQPQIPQQHQQLQQLHIQQIQQQQQQQTQQHQAL
QQQYQQQQAALQQQQQQIQQQHQHLQQQQIAQQHQQMQLQHEQMHQQQQQMQQQQQQIRQ
QIIEMRQQQQQLQQQHQQIQQQHQQMQRQHQQMQQQLKLQITLPPPPTGYPTISLQQFQV
PHPSPELGPERGQQGHTQSHTLGRPSLPRSRPPSFIDVDSIRSRPPSFLEADTSRSRPPS
FVDIDTIRTRPPSFIDVDTGTLRSRPPSFLDADSSRSRTLSFIDTDTLRSRPPSFLDAET
SLEIQMRKVNAPPPYPGTVVSAATATTSTAPQTLITNCDNPNILVTADPCLKKDEFSLHP
VGLQYQMGYERITTFDSSGNVEEVCRPRRRLIRNQNAYAVQGMGGSATLKVTSSSDSKKI
HLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQVNINTTTLPPPQRMDSSHMIHATLRRD
RRDGESRLKVSQMVDASRTLPSKSKINSAALALSYQQRVPTALYTCTQCSSNSSSTSVSV
SGGGSSSSGIAGGTVVRQDFPPGKGAHHSTIIVHSKSTSPLASQSSYNLLSPIDNSRDRT
VYVNSAFTEDEALSQQCRHLTLGEVSLTLKRPPPYQWDPNTAEEFWIPQEQTILAPPPPP
THKPPPPLIFSNAQHLDMTRLPFLLSTKPPSSPSTVTFPSGYQISLSPFPPGGGQGGPPL
QSMQSPPPPCPPNEVVAPVPQFTQQDPNLVLPPGYPPNLANLACCPLPPMYPGASSCAGL
QLQPVSLHPWNPYSLPMQDPSGSATLPSKSHQLLEKPVLSPSPPTVPPPPPPSLPPPPPP
TMLPKPKSPTEELTESASSFQEPSSLNESPVPDRQGTDRFSKKSRKRLDSRAEEANMTTV
SEGKSKKEGRALSDFNSLISSPRLGGRDKKKPKGQREQLNKTKKLNRTSTTSEFQDSSES
EPELFISGDELMNQSQSSKKGWKSKRSLRMASELEEIKCRKANEREDRGLGSQGFVYVMA
NKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSAV
QAFAVALANVTQRLK
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaactgtgagcctggtcactcagtaaggatgttagctgctgtggaacatggt
cccatcctctgcagtgactccaacatcctctgcctctcctggaagggccgggtccccaag
agcgagaaggacaagccggtgtgccagcggcgctactatgaggagggctggttggccaca
gggaacgggagaggggtggtgggcgtaacgttcacatccagccactgcaggagagacagg
aacacacctcagagaatcaacttcaacctgcgaggacacaacagtgaggttgtgttggtc
cgttggaatgagccctttcagaagctggccacgtgtgacatggagggaggcatctttgtt
tggattcaatatgagggacggtggtctgtggagttagtgaatgaccgcggtgcccaggtg
agtgacttcacatggtctcatgacggcagccaggccctgatcgcctaccgggatgggttt
gtcctggtgggctcggtcagcggacagagacactggtcctcagagattaacctggagagc
cagatcacctgtggcatctggacacctgatgaccaacaggtgttgtttggtacggctgat
ggtcaggtgatagtgatggactgccatggtcgtatgatcgcccacgtcctcctgcatgag
tcagatggcatcgtcggcatgtcctggaactgtccctgtttccttgtggaggacagcaca
gagagcgacaccgactctgatgacaataacccacctcaagtacgtaacctgaagcccctt
ctgacagtcagcttcatatcaggagacatcagtttgatgaacaactacgatgacctcgct
cctaccgtcatccgctcaggactcaaagatgtagaggtccagtggtgctcgcagggggac
ctcctggcagtagctgggatggagagacatggtgtccccggactcccctctgactctatc
atgaggaacgccctggtcaagttctacaatgtccaaggagaacatatctacacgttagaa
acacctgcccagcgccccatcaccaccatctgctggggccatagagactctcgtctgttt
ctggcatgtggcccagcgctgtatgtggtgcgagtggagcaccgggtggccagcctgcag
ctgctgtgccaacagggcatcgccagcgccctgcgggaggagagggacgtgggcaaactc
aacatgccctccttactctgctcctatgtcaccaccgccttcatacccaccatcaagcct
cccattcctgatcccaacaacatccgggactttgtcagctaccccactgctggcaacgag
aggttgcactgcaccatgaagcgagcggaggacaaccccgaggcagggggaccctgttac
accctatacctggaacacctaggggggctggtgcctatcctcaaaggcagacgcatcagc
aagctacgcccagagttcatcatcatggaccccaaaacagacagcaaagcaggtgggctt
ggcacaggaaaagacgaggtgtgtgtgaatgctatgatctcctacatgactgacagctgt
aactgttccgactccagcgacattgagttgagtgatgagtgggttgggaagaagtcgcct
aaactatccagaggaaacaggtctcccaagcattccagaaggaatatggaatcaagaaaa
tctcccaagacgtctaggactagtcaggaaggacttcgatcgccaaggttaccaacgaag
aagcctctgattcgttctcccagtctgacacgtcgagagatgtccatggatggaatctct
gagcataattacctggctcaagtcacgtccaatatttgggggactaagttcaaaattgtg
ggacttgcttctttcttacctgctaatctgggtgcagttatctataagaccagtttgctc
catctacaaccaaggcagatgacaatctaccttccagaggtgcggagaatatcacttgac
ttcatgagtctgccggtctttaacccaaacgtcttcagtgaggatgaggatgacttgcca
gtaacgggaccatctggagtgacaggcgacaaccctccatgtacggtcaacatccccatc
gcgcccatccacagccccgcccaggccatgtcccccactcagagcattggtttggtccag
tccctgctggccaatcagaacattcagctggatgtcctgaccaatcccacggctacggct
tcagcagcagcagcagcggcagcagcagcggcctcagcctctgttctggggtctgatcat
ggtcaggatgctgtggcagtacattacagtgggactctaggaaggtactctaacccagga
caggtgatatttaatgggctagagatgggtcccctcctggctggaacattacctccacct
ccgcctccacataacctcccccaacaacctcaccaacaacgtcctcagttacaacagacg
caccaacaacagcagtccaaacaaccacagcagatacaaacgcaacagcagcagcagcag
cagcaacaacagaggatgcaacatcaacaactacagcaccaacaaccacagatttcacaa
catcaacaactacagcacaaacaaccacagattccacaacaacatcaacaactacaacag
cttcacatacagcagatccaacagcagcagcagcaacagactcagcagcaccaagcactg
caacaacagtaccaacaacaacaggcggcactgcaacagcaacaacagcagatccaacag
cagcaccaacacttgcaacagcagcaaatcgctcagcagcaccagcagatgcaactgcag
cacgagcaaatgcatcagcagcagcaacaaatgcagcaacaacaacagcagatccgacag
cagattatagagatgaggcagcaacagcagcagttgcagcagcagcatcagcagatacaa
cagcagcaccaacagatgcagagacagcaccaacaaatgcagcagcaactaaagttgcag
atcaccttgccccctccgcctactggctaccccaccatctctttgcagcagtttcaggta
ccccaccccagtccagagttgggaccagaaagaggacagcagggccatactcagagccat
actctgggcaggccaagtctaccgcgatccaggcctccatcattcattgatgtagacagc
atacggtctagacctccttccttccttgaagcagacacatcaagatctaggccgccgtca
ttcgtcgacatagacacaatacggactagacctccttctttcattgatgtagataccggt
acattgcgatctagacccccgtctttcctcgatgcggactcctcccgatctagaactctt
tcattcatagacacagacacactacggtctagacctccttccttccttgatgcagagact
tcccttgagatccagatgaggaaggtgaacgctccccctccctacccaggaaccgtagtg
tctgcagccaccgccacaacctccaccgctcctcagaccctcatcaccaactgtgacaac
cccaacatactggtcacagcagacccttgtctgaagaaagacgagttctcactccaccca
gttggtctccagtaccagatgggatacgagaggatcacaacctttgacagcagtgggaat
gtagaggaggtgtgtcgccctcgtagaagactcatacgcaaccagaacgcctacgctgtt
caaggcatgggaggttctgccacacttaaagtcacctcatcgtctgacagtaagaaaatc
catcttccttacagctcagcgactctaagccgcctctcggtgccacgatactccataccc
agcggagacccacccccctacccagatccagccaatcaggttaacattaacacgacaaca
cttcctcctccccaacgcatggacagtagtcacatgattcacgctaccttgcgacgtgac
aggcgagatggggaatcccgcttgaaggtgtcccagatggttgatgcttcaaggactcta
ccgtccaagtcgaagatcaacagtgctgctctagcgctctcttaccagcagagagtgcca
acagctctgtatacctgcactcagtgcagcagcaacagcagcagcaccagtgtcagtgtt
agcgggggtggtagtagcagcagtggcatcgcaggaggcactgtagtgcgacaggatttc
ccaccaggaaaaggtgctcatcacagcaccatcattgtccactccaaaagcacttcacct
cttgcttctcagtcatcgtacaatctgctgagtcctattgataacagcagggataggact
gtatacgtgaactctgcctttactgaagacgaggcattaagtcagcagtgtcgtcacctg
actcttggggaggttagtttgactctgaaacgtcctccgccataccagtgggacccaaac
accgcagaggagttctggatacctcaagaacagactatcttagctccgcctccaccacca
acacacaaacccccacccccactcatcttcagcaatgctcagcacctggacatgacgcgg
ctgcctttcctactctcaacaaaaccccccagcagcccaagcactgttactttcccatcg
ggttaccagatctccctgtcacctttccctccagggggaggtcagggtggacccccactc
cagtcaatgcagagccctccaccaccctgccctcccaacgaagtagttgccccagttccc
cagttcacccagcaggaccccaacttggtcttgccacctggataccctcccaaccttgcc
aacctggcttgctgccctctgccaccgatgtacccaggagctagctcctgtgccgggctt
cagctgcaacctgttagcctgcacccctggaacccctacagcctacccatgcaggacccc
tcaggctctgccaccctgcccagcaagtctcatcaactgttagagaagccagtcctctcc
ccatctcctcctacagttcctcctcccccacctccttcacttcctcctccacctccacca
accatgctgccaaaacccaaaagccctacagaggagctgacggaatctgccagtagcttc
caggagccgtcttctctaaatgaaagccctgttccagaccggcaggggactgacaggttc
agcaagaagagccgtaaacgtctggacagccgagctgaggaggcaaacatgaccaccgtc
tcagaaggaaaatccaaaaaggaagggcgcgccctctccgacttcaactccctcatctcc
agccccaggcttggcggcagggacaagaagaaacccaaaggccagagggagcagctgaac
aaaaccaagaagctcaacaggacaagtaccaccagcgagttccaggacagttccgagagt
gagcccgagctcttcatcagtggagacgaactgatgaaccagagccagagctccaagaag
ggctggaagagtaagaggagcctgaggatggccagtgaactggaagagatcaagtgcagg
aaggccaatgagagagaggaccgcgggctgggcagccagggattcgtctacgtcatggcc
aataagcagccactctggaacgaggcaacacaggtctaccagctggacttcggaggacgg
gtcactcaggagtctgctaagaactttcagatcgagttggatggcagacaggtgatgcag
tttggcagaatcgatgggaacgcctatatcctggatttccagtatcctttctcagcagtg
caggcctttgctgtggccttagccaatgttactcaaaggcttaagtga
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integrated database retrieval system
