Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383950
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Entry
139383950 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Nkx-2.2a-like
KO
K08029
homeobox protein Nkx-2.2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139383950
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139383950
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
139383950
NCBI-ProteinID:
XP_070984671
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Position
25:15180424..15187437
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AA seq
299 aa
AA seq
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MPMIVXLPQILCIAADCQTGAATFLHTFPQNMSLTNTKTGFSVKDILDLPDTNDEEGSIT
GPEEDNEGSETTKNTGVLVQSPLENVQNLPIKNPFYDSSDNPYTRWLATTDSIQYSLHGL
SASSQDSAKSPEPSADESPDNDKETSSNGSDSGKKRKRRVLFSKAQTYELERRFRQQRYL
SAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTHLPSPRRVAVPVLVRDGK
PCHTLKAQDLAATFQAGFPLSAYSAQTLHQMQYNAQYSAATTPQFPSAHHLMQTQQWTW
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgatcgtttaactccctcagatactgtgcattgcagcggattgccaaactggt
gcagcaactttcctgcatacatttccccagaatatgtcgttgaccaacacaaagacgggc
ttttctgtaaaggacattttggacctccctgacacgaatgatgaagaaggatctatcact
ggaccggaggaagataacgagggatcagagacaacaaaaaacactggagttttggtgcaa
agtcctctagaaaacgttcagaatctgcctataaagaaccccttttatgatagtagtgac
aatccttacacaagatggcttgccaccacggacagtatccaatattcgctgcatggtcta
tcagctagttctcaagactcagccaagtccccagaaccctccgcggacgaatcgccagac
aatgacaaggaaacttcaagcaacggcagcgactccggtaagaagagaaaaagaagagtg
ctgttttccaaagcacagacgtacgaacttgagcgtcgatttaggcaacagagatacctt
tccgcgccagagagagaacacctcgcgagtttgattcgcctgactccaactcaagtgaaa
atttggttccagaatcatcgatacaaaatgaagagagcgcgcgctgaaaaaggtatggaa
gtgacccatctcccctctccccggcgggtggccgtgcctgtcttagtcagggatggaaag
ccttgtcatactcttaaagctcaggacttggcggccacatttcaggctggattccccctc
tcggcatatagcgcccagacccttcatcaaatgcaatataatgctcagtacagcgccgcc
accacgccacaattcccttcagcacatcacttgatgcaaacgcaacagtggacttggtga
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