KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383959
Entry
139383959         CDS       T10872                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139383959
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139383959
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139383959
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 Prok-RING_4 zf-rbx1 zf-RING_4 zf-UDP zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_10 Rtf2 zf-RING_11 IBR_1 zf_RING_Vps8 Sina_RING zf-ANAPC11 Zn_ribbon_6 zf-RING_6 RNase_II_C_S1 TerY_C TRAF3_RING
Other DBs
NCBI-GeneID: 139383959
NCBI-ProteinID: XP_070984684
LinkDB
Position
25:complement(21613068..21623000)
AA seq 188 aa
MSEAEQDRIEIPDTRCSNNTNEGTADSSNTSHLETIEVQESSDPLVAEEEMVDLTHQVFP
SSFVDLTNNNDSIVVVDEGPKRRRDWESYVLSSDEEEAAVIVPDSPATAPLSTAPEPSST
ARSTPTTISCPICMDMFGEIIDGGRTLVSSQCGHLFCNTCIRDSLAKSQTCPTCRKKLNH
QQYHQIYI
NT seq 567 nt   +upstreamnt  +downstreamnt
atgagtgaggctgagcaagatagaatagagatccctgataccagatgctccaacaataca
aatgaaggcacagcagacagcagcaacacgtcacaccttgagaccatagaggtgcaggag
agcagtgatcccttggttgcggaagaggaaatggttgatttgacccatcaggtttttcca
tcatcttttgtggacctcaccaacaacaatgactcaatagtggttgtagatgaaggtcca
aagcgaagacgtgactgggaaagttacgtgctgagcagtgatgaagaagaggcagctgtt
attgttcctgacagtccagcgacagcccccctctccactgcccctgagcccagcagcaca
gccagatcaaccccaacaacaatcagttgtcccatctgtatggacatgtttggagagata
attgatggtggaagaacgcttgtctcctcccagtgtggtcacctgttctgcaacacatgc
atacgtgactcacttgccaaatcacagacgtgcccaacctgcaggaagaaactgaatcat
cagcagtatcatcaaatttacatctaa

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