KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383973
Entry
139383973         CDS       T10872                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013  Nucleocytoplasmic transport
ocla03015  mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:ocla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     139383973
Spliceosome [BR:ocla03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    139383973
SSDB
Other DBs
NCBI-GeneID: 139383973
NCBI-ProteinID: XP_070984700
LinkDB
Position
25:15792741..15808943
AA seq 872 aa
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVVKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQDNIAGIP
SAFPKAQSILKEIKQRQIEQEKLASLKKIDDEKKEKENRERESPRRRKSRSQSPRRRSPV
KRERKRSHSRSPRRKPSPSSSPPPPAPAVTLVSVTLPQSIEEPQPEPDTSESTIPEPVIQ
EASSTSDVVKPDTVVVVPDSVTEVKEPSPDKAPKKDRLKPREREKDSRRDRPHHRSRSHS
RSRRRPRSRSRSYSPRRRPSPRRRLSPRRRSPPRRGPPGPRHRRSRSPVRRRRSRSPSSS
GSSSTSHSPHKKAMKRTSTTPPRKQPRGHAADPSLSPSRRRAPNGSPSGKTQRSASPRAR
KGRASASPSRSAGSKKKPGTRNDSPSPVPKPRQSEASESEGATADSVQQRRQYRRQNRET
SSEAGSSSSSEGEGSKRPGRGPVARNGDVRRRRSHSPSSPRRRHRDGSPRKRRSPSPGGR
RSPPRRRRSPSPPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPTPLGPQKRRLSGSPSPK
RLSPVPKRRPSRSPKRRSPPPQKRRTPPSSTSPPRHRRSPMLPSNRPGRDTRSPPLAHSN
RLSPSPANRGRTSPQGRFDTSPPGQRRQVSPSHGNRAIRRVSRTPEPRKNQRASQSPQPM
RRVSSRSPSGSPKPGALKRPASGSPSPGHSASGSPPAPPAKKASSGSGSPSPNKNSDTEP
GGKKNKKKKKEKKHKKEKKHKKHKKHKKEKCDVPVAAGDDQENQGMEGDAASNPKKESDS
EVEECLDDLEKHLREKALRSMRKAGKLSPPLS
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggacgcggggttcttccgcggcacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaaacttctaaagcaactgaaatttgcagaatgtctggaaaagaaggtggatatg
accaaggtgaacctggaggtcgtcaaaccttggatcactcagcgagtgacagagatcctg
gggttcgaggatgacgtcgtcatagaatttatatttaaccagctggaagaaaagcacccg
gacagtaagatgatgcagatcaacctgactggcttcctgaatgggaagaatgcccgagag
ttcatgagggacctgtggcctctgctgctcagcgctcaggacaacatcgccggtatcccc
tccgccttccctaaagcacagtcaattttaaaggagatcaaacagagacagattgagcaa
gagaagctcgcttctctgaagaagattgatgatgagaagaaggaaaaggaaaacagagaa
agggagagccccagaaggaggaagtcaaggtcacagtctccacggcgacgatctccagtg
aagagggagaggaagcgcagtcactcccgctcaccgaggcgtaagccaagtcccagcagc
tcccctccaccaccagccccagctgtcacccttgtcagtgttaccctgccccagagcatt
gaggagccccagcctgagccagacacctcagagagcaccatacctgagccagtcattcag
gaggcctcctccaccagtgatgtggtaaagccggacactgtggttgtggttcctgactct
gtgactgaggtcaaagaaccctccccagataaggctcctaaaaaggataggctcaagccc
agggaaagggagaaggacagcaggagagacaggccccaccaccgctctcgctcccattcc
cgctcccgcagacgacccagatcacgctccaggtcttactccccccggcggaggccgagc
cccaggagacggttgtcccctcgtcgtaggagcccccccagacgtggccccccaggcccc
agacacaggcgcagtcgctcccctgtccgcagacggcgctctcgctccccatcatcctct
gggagcagctccacgtctcactcacctcataagaaggcaatgaagagaacgtcaaccaca
ccacccagaaaacagccccgcggccatgcagctgacccctccctcagcccctccaggaga
agagcccccaatggcagcccctctgggaagacacaacgctctgcctccccgcgggccaga
aagggccgggcctcagcctccccatccagatcagctgggtcaaagaagaaaccaggaacg
aggaacgattcaccgtcccctgttccgaaacccaggcagtctgaggcatcagagtcagag
ggggctacagccgattctgtgcagcagcgacgtcagtatcgcaggcagaatcgggaaacg
tcttcagaggctggatcatcatcatcctcagaaggtgaggggtccaagaggccgggcagg
gggccagtggcgaggaacggggatgtcaggcggcggcgtagtcactcgccctcctccccc
aggagacgacaccgggatggctcccccagaaaaagacgctctccttcccccggaggacgc
agatctcccccaaggcgtcgcagatctccctctcctcctcctaggcgcaggtctccctct
ccaccacctcgcaggcgctccccctcccccagacggtactctccacccatccagcggcga
tacagccccactcctttgggcccacagaaaagaaggctgtcagggtctccctctcccaaa
cgcctatccccggtgcccaagcgccgtccctccaggtcccctaagcgcaggagtccccct
ccccaaaagagacgcacacctccctcatccacctctccccccagacacaggagaagcccc
atgctcccatccaaccgaccaggccgggacactcgctcacccccccttgctcacagtaac
cgcctgtccccttcccctgccaaccgtggccgaaccagtcctcaggggcgctttgacacc
tctccacctggacagaggcgccaggtgtccccctcacacggcaacagggcaatccgcagg
gtgtcccggacaccagagccccgcaagaaccagagagcctctcagagcccccagccgatg
aggagagtgtcatcaaggtcaccgtctggttcccctaaaccaggagccctgaaacggcca
gcttcaggctccccttctccaggccactcagccagtggatccccacctgcacccccggct
aaaaaggccagcagcggctctggcagcccttctccaaacaagaattctgacactgagcct
ggaggaaagaaaaacaagaagaagaagaaggaaaagaaacacaagaaggagaagaagcat
aagaagcacaagaaacacaagaaggagaagtgtgatgtgccggttgctgctggggatgac
caggagaaccaggggatggagggcgacgcagcctccaacccaaaaaaggaatcagacagt
gaagtagaagagtgtctggacgacctggagaagcacctgagagagaaggcactgcgttcc
atgaggaaagctggaaagctgtcccctccactgtcctga

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