Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384070
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Entry
139384070 CDS
T10872
Name
(RefSeq) 26S proteasome regulatory subunit 4-like
KO
K03062
26S proteasome regulatory subunit T2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139384070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139384070
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
139384070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
AAA_16
AAA_3
AAA_5
RuvB_N
AAA_28
ATPase
AAA_14
AAA_25
NPHP3_N
RNA_helicase
TIP49
AAA_33
NACHT
IstB_IS21
NB-ARC
Mg_chelatase
AAA_7
Viral_helicase1
AAA_24
Parvo_NS1
ABC_tran
SLFN-g3_helicase
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
139384070
NCBI-ProteinID:
XP_070984807
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All DBs
Position
25:27218950..27224403
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKSKGPDAASKLPLVTPHTHCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGNLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDQQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTLLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVILDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggaggacatggacccggaggaggaaagaaagacgacaaggat
aagaaaaagaaatatgaaccacctatccccaccagggttgggaagaggaagaagaagagc
aagggacctgatgctgccagcaagctacctcttgtaactccccacacacactgcaggctg
aaactgctgaagcaggagaggatcaaagactacttgctgatggaggaggagtttatcagg
aaccaggaacagatgaaacccctggaggagaaacaggaggaggagaggtctaaggtagat
gatctgagagggactcccatgtcagtggggaacctggaggagatcattgatgacaaccac
gccatcgtttccacgtctgtgggctctgagcactatgtcagcatcctctccttcgtagac
aaagatctgctggagccgggctgttccgtccttctcaaccacaaagtccatgccgtcatt
ggggtcctgatggatgacaccgatcctctggtgaccgtgatgaaggtggagaaggctcca
caggaaacatatgctgacattggtggactggaccagcagatccaggaaattaaggagtct
gtggagctccctctgacccatccagagtactatgaagagatgggcatcaagcctcctaaa
ggagtcattctgtatggagcaccagggacagggaagaccctattggcgaaagcagtggcc
aaccagacttcggcgactttcctgcgtgtggtgggctctgagttgattcagaagtaccta
ggggatgggcccaagctggtccgagagctgtttagggtggctgaggaacacgcaccctcc
atcgtcttcatcgacgagatcgacgctatcgggactaagagatatgactctaactcagga
ggggagcgggagatccaaaggactttgctggagcttctcaaccagctggatggctttgac
tccagaggagatgttaaggtcattatggccaccaacaggatagagaccctggaccctgca
ctcatcagaccaggccgtattgaccgaaaaatagagttccccttgccggatgagaagacc
aagcgaaggatcttccagatccacaccagcaggatgactgtggcagacgatgtgatcctg
gatgacctgatcctagccaaggatgacctctccggagctgacatcaaggccatttgtaca
gaggcagggctgatggctctgagagagcgcaggatgaaggtgactaatgaggactttaag
aagtcaaaggagaacgtgctgtacaagaaacaggaagggacaccagagggcctgtacctc
taa
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