Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384095
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Entry
139384095 CDS
T10872
Name
(RefSeq) uncharacterized protein
KO
K08332
vacuolar protein 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139384095
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139384095
Membrane trafficking [BR:
ocla04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
139384095
Other autophagy associated proteins
Micronucleophagy
139384095
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139384095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ARM_PUB
HEAT_2
ZER1-like_2nd
Cnd1
V-ATPase_H_N
HEAT
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
139384095
NCBI-ProteinID:
XP_070984841
LinkDB
All DBs
Position
25:complement(35899341..35905810)
Genome browser
AA seq
532 aa
AA seq
DB search
MATGLCEKCAQLLTDFVAYVKRLPSELVQKITECIKSLSRCSCLRRKRATVASYISEQHE
RQAARTLLNHLDTVDYPLPVTLLEPYTALLLSNDMEVQRITTLSLVHLLVKNKVSKEQVI
ETGMLMPLLEMLQSGDPTVQCNSCQCIASLASSDSNREAIVSAEGVIPLLVLAKSYDPQV
QQNAVWALLNLTQSERTMGVLCQEGAIPVLALLLQSSNCEVQFYSCSALSNIATVPGHHP
KMLGIGDRFLLKSLLTLMSSSVQKNASQACRCLQILSGNVVTQEQLMYLNCVLPLKALLC
SATPPLTESAIALLSELATHQPNREGLVNEGLVQVIGQLLLCHRSSSIINHSVVTITNLS
STSEGQQAVMDSECVTGLLKALVSSVTSEETVLCVTSCLHHLTSWDLLQSHLATKMTPEH
VSSLVKFSAQMDNLELSYRSASIISKLKMNEHVIQLLTPQYAAISEYLLMYLKNQEVRFQ
QLSIVTLCNLKKDGEFSVLMSGSVLEKQLKWVHAQTEQTRELLQAIQMPPSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggactatgtgaaaagtgtgcacaactgctaacggacttcgttgcttatgta
aagagattgccgtctgaacttgtacagaagataacggagtgtataaagagcctgtcaaga
tgtagctgtctgcggaggaagagagcaactgttgcatcctatatctcagagcagcacgag
agacaggctgctcggacactactgaaccacctggacacagtggattatcctctacccgtt
actctcctggaaccatacacagccctactcctctctaatgacatggaggttcagaggatc
accactctgtctctggttcatctgctagtgaagaacaaagtgagtaaggagcaggtgatt
gagacagggatgctgatgcccctgctagagatgctccagtctggggaccccactgtccag
tgtaactcctgccaatgtattgcctcactggcctcctcagactcaaaccgggaagctatt
gtgtcagctgaaggggtgattccactactggttttagccaagtcttacgatccccaagtc
caacagaatgcagtctgggcccttttaaacctcacacagtctgagaggacgatgggggtg
ttatgtcaagaaggagccattcctgtactggcacttctgttgcagtcctccaactgtgag
gtccagttctacagctgctctgccctgagcaatatagccactgtcccgggccatcatccc
aaaatgttgggcattggagaccgttttttgttgaagtctctgctgacactcatgtcctca
tcagtgcagaagaatgcatcccaagcttgcagatgcctccaaatcctttcagggaatgtt
gtgacccaggagcagctgatgtacctgaactgtgtgttgcctctgaaggccctgctgtgc
tccgctactccccctctgactgagtctgctatagcactactgtctgagctagccacacac
caacccaatagagagggcctggtgaatgagggcctggtacaggtgatagggcagctgctc
ctctgtcacagatccagctccatcatcaaccacagtgttgttaccatcaccaacctcagc
agcaccagcgagggacagcaggctgttatggacagtgagtgtgtaacaggacttctcaag
gcccttgtgtccagtgtgacctcagaggagaccgttctgtgtgtcacttcctgtttacat
cacctgacaagctgggacctacttcagtctcatttggccacaaaaatgactcctgaacat
gtttcaagtctggtgaagttctctgcacaaatggacaatctagagctgtcctatcggtct
gcttccatcatcagcaaactaaagatgaacgaacatgtcatccaactactgacgccacaa
tacgctgccatctctgaatatctcctgatgtacctcaagaaccaggaagtgcgattccaa
cagctgagtattgttactctatgcaacctgaagaaagacggagagttttcagtgctgatg
agtggtagtgtgctggagaagcagctaaaatgggtgcatgcacagacggagcagaccagg
gagttactgcaggcgattcagatgcctccatcctcctaa
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