Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384149
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Entry
139384149 CDS
T10872
Name
(RefSeq) protein transport protein Sec23A-like
KO
K14006
protein transport protein SEC23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139384149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139384149
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
139384149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
139384149
NCBI-ProteinID:
XP_070984936
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Position
25:30447412..30486156
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AA seq
765 aa
AA seq
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MATFPEFIAQNEERDGVRFSWNVWPSSRLEATRMVVPVASLFTPLKERPDLPPIQYEPVL
CSRATCRAVLNPLCQVDYGAKLWACNFCYQRNQFPPTYAGISEVNQPAELLPQFSTIEYV
VQRGPQMPLVFLYVVDTCMEDEDLQALKESLQMSLSLLPPTALVGLITFGRMIQVHELGC
DGISKSYVFRGTKDLNAKQLQEMLGLTKPTAAQAGRGPQAPQPPLSNRFLQPVQKIDMNL
TDLLGELQRDPWPVTQGKRPLRSLGSAMSIAVGLLECTFPNTGARIMTFIGGPATQGPGM
VVGDELKTPIRSWHDIEKDNAKFMKKGTKHYEALASRASINGHIIDIYACALDQTGLLEM
KCCSNHTGGYMVMADSFNTSLFKQTFQRVFTKDVAGAFKMAFAGTLEIKTSREIKISGAI
GPCVSLNAKGPCVSENEIGTGGTSQWKICGLDHNTTLAVYFEVVNQHNAPIPQGGRGAVQ
YVTQYQHSSGQKRIRVTTTARNWADAGTQIQSIAASFDQEASAILMARLAVYRAETEEGP
DVLRWLDRQLIRLCQKFGDYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHQFMRQDLTQSLIMIQPILYAYSFNGPPEPVLLDSSSILPDRILLMDTFFQILIYH
GETVSQWRKAGYQEMPEYENFRHLLQAPADDAQEILHSRFPMPRYIDTEFGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttcccagagtttatcgcccagaatgaggagcgtgatggggtgcgtttcagc
tggaacgtctggccctccagtcgtctggaggccacccgcatggtggtccccgtggcctct
ttgttcacccccctgaaggagcgcccagacttgccccccatccagtatgagcctgtgctg
tgtagcagggcgacctgccgcgctgtccttaacccgctctgccaagtggattacggagcc
aaactgtgggcttgcaacttctgctatcagagaaatcagtttccacctacctatgctggg
atatcagaagtgaaccagccagctgagctgctgccacagttctccaccattgaatatgtt
gtccagagaggtccccagatgcctctggtcttcctgtacgtggtggacacctgcatggag
gatgaagacctgcaggctctgaaggagtccttacagatgtccctgtcgctgctgcctcct
acagccctggttggcctcatcaccttcggacgcatgatccaggtccacgaactgggctgc
gatggcatctcaaagagctacgtcttcaggggaactaaagaccttaacgccaagcagctg
caggagatgctgggcttgaccaaacccactgctgcacaggcaggacggggaccacaagct
ccacagccccccctctccaacagattcctccagcctgtccagaagattgacatgaacctg
acagacctgcttggagagctccagagggatccctggcctgtcactcagggaaaacggccc
ctccgctcgttagggtcggccatgtccatcgctgttggcttgctggagtgcaccttcccg
aacactggggcacgcatcatgaccttcatcggtggaccagccactcagggtccaggcatg
gtggtaggagatgagctaaagacccctattcgctcctggcacgacattgagaaggacaac
gccaagttcatgaaaaaggggaccaaacattacgaggcattggcgagccgtgcctccatc
aacggccacatcatagacatctatgcctgtgctctggaccagaccggactgctggagatg
aagtgttgttccaatcacaccggaggctacatggtgatggcagactctttcaacacctca
ctattcaaacaaaccttccagagggtctttaccaaagatgtggctggagccttcaagatg
gccttcgctggcactctggagataaagacgtctcgagagatcaagatttcaggagccatc
gggccatgtgtgtcattaaatgccaaagggccgtgtgtgtctgaaaatgaaattggaaca
gggggcacatctcaatggaagatatgtggtcttgaccataacaccactctggcagtgtac
tttgaggtggtcaatcagcataatgcacctataccccaggggggccgaggcgcggtccag
tacgtcacccagtaccaacactccagtggacagaaacgcatccgagtcaccaccacggcc
agaaactgggcagatgcagggacccagatccagagcattgcagcatcatttgaccaggag
gcctcagccatcctgatggccagactggctgtgtatcgcgctgagacggaggagggtccc
gacgtgctacgctggctggatagacagctcatccgactgtgtcagaagtttggagattat
cataaggatgatcccaactccttccgcttctcagaaactttttctctctatccccagttt
atgttccatctgagaaggtctccatttctgcaagtgttcaacaacagtccagatgagagc
tcgtactacagacaccagttcatgcgtcaggacctgacccagtctctcatcatgatacaa
cccattctctatgcctactccttcaacgggcccccagagcctgtgttgctggacagtagc
agtatccttcctgatcgcatccttctcatggacaccttcttccagatcctcatctaccat
ggcgagactgtgtctcagtggcgtaaggcaggctaccaggagatgcccgagtacgagaac
ttccgccacctgctgcaggctccagcggacgacgcccaggagatcctgcacagccgcttc
cctatgccccgctacatagacacagagtttggcggatcacaggctcgtttcctgctatct
aaagttaacccatcacaaacccacaacaacatgtatgcatggggccaggagtcaggagcc
ccaatcctgacagatgacgtcagtctacaggtattcatggaccacctgaagaagctggct
gtgtccagcgctgcctga
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