Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384202
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Entry
139384202 CDS
T10872
Name
(RefSeq) AT-rich interactive domain-containing protein 4A-like isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139384202
03036 Chromosome and associated proteins [BR:
ocla03036
]
139384202
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
ARID
139384202
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139384202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
139384202
NCBI-ProteinID:
XP_070985031
LinkDB
All DBs
Position
25:30654122..30702986
Genome browser
AA seq
1435 aa
AA seq
DB search
MKAADEPAYLTVGTEVSAKYRGAFCEAKIKTVKRTVKVKVMLKGDTTSQVVQDDQVKGQL
RVGSTVEVKSAEGICSEATINKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKGNRGGRRSSQAHANDDKESSSSDDDSEDRRRLNDDLLGKVA
SIQSGTDRTSWYLALVISPSCNDDLTVKKDQCLVRSFADSKFRTVARKEIHEVNMDSLSK
AEFSSRNGLDEAVHFLKTKVVPDSWKMDMSEILESSSSDEEEDKEGKDSEEEEEEEEEKE
DDEQPEDEADPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYQQGGCDK
IESGSVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSACIVFRTIHHNEARPA
PQSSQSQTEQKAAQVPEVKVKDKDKVGKGPTPPVQNESTAATEDKPSQEEAESGSESDKE
SHKDIASPRGRRRCTVTPVKAEVKEPVKLEKIKEQEPSDLGVGETSGEETGGQKESSRSD
GGDTQGNGCSRRLEESDKESEDEVEDEDSERRVGEGAEDEDSEDSVTGTKVKVKYGRGKT
QKIYEANIKKTENDDAGDVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKNKQKKKVMN
KEDGEKDKQGKLGGLRGRPLLRTTPPSANRSVSKTPSREGRSSSKSKSDTSPLPNGEGTP
RRRTRTTSGMYDSDRDANSNDESGNSSEDSESEDSPEKKPAWAERTDPATARKQEEEEDL
RVERGRAEAVAAAAAAAQLQPPSSPKEKEQQQQENKLPESEPEKVEAEEQPQTPPMTPEP
DRPKEEDPPNLKSPRPKATRRSNVREPERNTNNTGSEIPTTPNHTETESFPSPCPLKRQD
EPMVVLHCLPAEHLPSMPDLPIMDSDTDSALEEEICREERGVAKRKATDHRTPDKKVRLD
WREDTARMASPGGRPHDSPGGRPHDSPGGRPHDSPGGRPHDSPGGRPHDSPGGRPHDSPG
GRPHDSPGGRPHDSPGGRPHDSPGGRPTTPERRLESGGLKEEECLKPAKGKTEPEVKTEM
PALTPEVRCRGPGEGGVAGGQPRSEQPDYGAEEELMPQIGPEALVCHEVDLDDLDEKDKT
SAEDLLMMMSQGKVHAPPPSNASSHHPQTHNNPPPSSGGAAPPQVFSPTSAPSPDESIST
KSESDVTIEVDSVAGESQEGLGDNESANSNCFEANTSSSNSSMSLQERDTKDRGQKRLMD
CNMSCSAKKQKRNQKRPSTTSKMEKNGAEYSSDSEDLAVMDPSCKMTPVKHSMSKGSLKL
VSPNSKELEKDKHKHKQSSFPSPRTYKWTFQLNELDSMTSAERISFLQDKLQDIRKYYMS
LKSEVASIDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcggacgagcctgcctacctgaccgtggggacagaggtcagcgcgaaatac
agaggtgccttctgtgaggcaaaaatcaagactgttaaacggacggtgaaggttaaggtg
atgctcaaaggagacactacctcacaagttgttcaagatgaccaagtgaaaggacagttg
agggtgggctccacagtggaggtgaagagtgcagaggggatctgcagtgaggcaaccatc
aacaaacttacagacgccagttggtacacagtggtgtttgacgatggagatgagaagaca
ctccgcaggacgtctctgtgtcttaagggcgagagacattttgctgagagcgagacgttg
gaccaactgcccctgaccaacccggagcactttggcacccccgtcatcgggaagaaggga
aaccgcggaggaaggaggtcatctcaggctcatgcgaacgatgacaaggagtcgtcgtcc
agtgatgacgacagtgaggataggaggaggctaaatgatgacctgctgggtaaagtggcc
agtattcagtctgggacagaccggacatcctggtacctggccctggtgatatcacccagc
tgcaatgatgacctgacagtcaagaaagaccaatgtttagtgagatcatttgcagactcc
aaatttcgcactgtggcaagaaaggagatccatgaagtgaacatggacagcctctctaaa
gctgagttctcatcgaggaacgggttggacgaggcagtgcatttcctcaaaaccaaggtg
gtccctgacagttggaagatggacatgagcgagatcttagaatcatccagcagtgacgag
gaggaggacaaggaaggaaaagatagtgaggaggaggaggaggaggaggaggagaaggag
gatgacgagcagcctgaggatgaggcggacccagaggagagggatcacttcctgcagcag
ttgtataagttcatggaggatcgagggacaccaattaacaagcctcctgtgctcggctac
aaggatctgaacctcttcaagctcttcaggctagtctaccagcaggggggctgtgacaaa
attgaaagtggatctgtgtggaaacaaatctacatggacctgggcattcccatcctaaac
tctgctgcctcctacaatgtgaagactgcctacagaaagtacctgtatggctttgaggag
tactgccgctcagcctgcatcgtgttcaggaccatccaccacaacgaggctcgtccagcg
ccccagtcctcccagtcccagacagagcagaaggctgcccaggtccctgaggtgaaggtg
aaggacaaagacaaggttggcaagggcccaacaccacccgtacagaatgagtctactgca
gccacagaggacaagccttcccaggaggaggctgagtcggggagtgagagtgacaaagag
agccacaaagatatcgcctctcccagggggaggagacggtgcactgtgaccccagtcaaa
gctgaggtgaaggagcctgtcaagctggagaagatcaaagagcaggagccgagtgatctg
ggtgtgggcgagaccagcggagaggagacgggtggtcaaaaagagagcagcaggtcagac
ggaggggacacccaggggaatggatgcagccgacgtctggaggagtccgataaagagtct
gaggacgaagtggaggatgaggacagcgagaggagagttggagaaggggctgaggatgag
gactcagaagactctgtgaccgggactaaggtgaaggtaaagtacggccgagggaagacc
cagaagatatacgaggccaatatcaagaaaactgagaacgatgatgccggagatgtcctc
tacctggtacactactacggctggaacgtcaggtatgatgagtgggtcaaagcagatcgg
atcatctggcctgtcgacaagggcggaacaaaaaataaacagaaaaagaaagtcatgaac
aaagaggatggagagaaggacaagcaggggaagctgggtgggttgagaggtcgccctctt
ctcagaaccactccccccagtgccaaccgcagcgtctccaagacccccagccgtgagggg
cgctccagcagcaagagcaaatctgacacatcacccctgcccaatggagagggtacccct
cgccgacgcacaagaaccacctctgggatgtatgactcggacagggatgccaactccaat
gatgagtcggggaattcgtcagaggacagtgagtcagaggattcgccggagaagaagcct
gcatgggcggagagaacggaccccgccacggcccgtaaacaggaagaggaggaggacctg
agggtggagagaggaagagcagaggcagtggccgccgcagcagcagcagcacagctccag
ccccccagcagccctaaggagaaggagcagcagcagcaggagaacaaactccctgagagc
gagcctgagaaagtggaggctgaggagcagccccagacgcctcccatgacccctgaaccc
gacagacccaaggaggaagacccccctaacctgaaatcccccaggcctaaagcaacacgt
agaagtaacgttagagagccagagaggaacaccaacaacactggctctgagatacccacc
actcccaaccacactgagactgagtcgttccccagcccatgccccctaaagaggcaggat
gagcccatggtggtccttcactgtctccctgctgagcacctccccagcatgcccgacctc
cccatcatggactccgacacagactccgccctggaggaggagatctgcagggaggagcga
ggcgtggccaagcgtaaagccaccgaccacaggacgccggacaagaaggtgcgtctagac
tggagggaggatactgccagaatggcatcgccgggcgggaggccccatgactcgccgggc
gggaggccccatgactcgccgggcgggaggccccatgactcgccgggcgggaggccccat
gactcgccgggcgggaggccccatgactcgccgggcgggaggccccatgactcgccgggc
gggaggccccatgactcgccgggcgggaggccccatgactcgccgggcgggaggccccat
gactcgccgggcgggaggcccacaactccagagcggaggctggagtcggggggactaaaa
gaagaggagtgtctaaagccagcgaagggtaaaacagagccggaggttaaaacagagatg
cctgccctcactccggaggtgcggtgtcgaggtccaggagagggaggtgttgcaggaggt
cagcccaggtcagagcagccagactatggagcagaggaggagctgatgccccagataggg
cctgaggcgctggtctgccacgaggtggatttggatgacctggatgagaaggacaagacc
tcagcagaagacctcctaatgatgatgagccaagggaaggtccatgctccccctccatcc
aatgcctcctcccaccacccccagacccacaacaaccctcctccatcctccggtggagct
gctcctccacaagtcttttcccccacctcggcccctagccctgatgagtctataagcacc
aagagtgagagcgacgtcaccatcgaggttgacagcgtagctggggagtctcaggagggg
ctcggtgataatgagtcggccaactccaactgctttgaagccaacaccagctctagcaac
tccagcatgtcactacaggagagagacaccaaggacagaggtcagaaaaggttgatggac
tgcaatatgagttgttctgcaaagaagcagaagcgcaaccagaaacggccaagcacaacg
tccaaaatggagaagaatggagcagagtacagcagtgacagtgaggacctggctgttatg
gacccctcctgtaagatgactccagtgaaacactcaatgtctaaaggaagcctgaagttg
gtctctcctaacagtaaggagttagagaaggacaagcacaaacacaagcagtcctccttc
ccctcccctcgcacatacaagtggaccttccagctcaatgaactggacagcatgacaagt
gctgagaggatttccttcttacaagacaaactacaggatataaggaagtattacatgtca
ctcaagtctgaagtggcctccatagacaggaggcggaagaggttaaagaagaaagaaaga
gaagtgtcccacaccacagcttcaacatcgtctggctcgtcagacactgggatgagcccc
tcctccgcctcaccgactcagaacactgtggctgtcgagtgcaggtga
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