KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384213
Entry
139384213         CDS       T10872                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082  ATP-dependent chromatin remodeling
ocla03083  Polycomb repressive complex
ocla04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    139384213
   03083 Polycomb repressive complex
    139384213
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    139384213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocla03036]
    139384213
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     139384213
  Histone modification proteins
   HAT complexes
    HATB complex
     139384213
   HDAC complexes
    Sin3A-HDAC complex
     139384213
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     139384213
    PRC2.2
     139384213
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     139384213
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    139384213
  Chromatin remodeling factors
   NuRD complex
    139384213
   NuRF complex
    139384213
   NuRF complex (fruit fly)
    139384213
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st eIF2A Beta-prop_RIG_1st MIOS_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 139384213
NCBI-ProteinID: XP_070985043
LinkDB
Position
25:complement(16828867..16832929)
AA seq 424 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARHMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMEVWQMAENIYNDEDPEGAADT
EVQA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgataaagaagcagcgtttgatgatgctgtagaggagcgggtgataaatgaggag
tacaagatatggaagaagaacacgcccttcctctatgacttggtgatgacccatgccctg
gagtggcccagcctcacagcacagtggctgcctgatgtcaccagacctgaggggaaggat
ttcagtgtacacaggctggttcttggcacacacacatcagatgaacagaatcacctggtc
attgccagtgtgcaactgcccaatgacgacgcgcagtttgatgcttctcactatgatagt
gagaaaggcgagtttggcggctttggctcagtcagcggtaagattgagattgaaatcaag
ataaaccatgagggagaggttaacagagcccgccacatgccccagaacccctgcatcatt
gccaccaaaaccccaaccagtgatgtgcttgtctttgactacaccaaacatccctccaaa
ccagatccatctggagagtgcaccccagatctgcgtttgaggggacatcagaaggagggt
tacggtctctcctggaaccccaacctgagtggttgccttctcagtgcttctgatgaccat
acaatctgtatgtgggacatcagtgcagttcctaaggaggggaaggttgtggacgcgaag
accatcttcactggacacacagccgttgtggaggatgtttcttggcatctactgcacgag
tcgctctttggatcggtagctgacgaccagaaactcatgatttgggacacgcgatcaaac
aatacgtcgaaacctagccatgctgtggacgcccacactgcagaggtcaactgtctgtcc
ttcaacccttacagcgagttcatcctggcctcaggctcagcagacaagactgttgctctt
tgggacctgaggaacctgaaactgaagctgcattcatttgagtctcacaaagatgagatc
ttccaggtccagtggtctcctcataatgaaaccatcctggcctccagtggcacagacagg
cgactcaacgtgtgggacctcagtaaaatcggagaggagcagtcgccagaggatgctgag
gatggtccacctgaactgctgttcattcacggtggtcacacagctaagatctcagacttc
tcgtggaaccccaacgagccctgggtcatctgttcggtgtctgaggacaacatcatggaa
gtttggcagatggctgagaacatctataatgacgaggacccagaaggagcagcagacact
gaggtccaggcatga

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