Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384219
Help
Entry
139384219 CDS
T10872
Name
(RefSeq) homeobox protein notochord
KO
K24876
homeobox protein notochord
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139384219
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
139384219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
139384219
NCBI-ProteinID:
XP_070985048
LinkDB
All DBs
Position
25:complement(45684926..45685933)
Genome browser
AA seq
258 aa
AA seq
DB search
MQVPNRPTRVDAYGYSAMRHYASLYAQPTGSQCAVATKPASGKSFTIDALLAKPVETHRD
WTSPKNQTAPPLLPFQTQMSSALSQYLYSPKMQHTPVHSHTQPGYSIYCCLPFSYHASCR
GAFQKHDTVLKGLSKSHSFKLKGGKSKRIRTSFTNEQLDRLEKEFARQQYMVGSERFLLA
SGLQLTEAQVKVWFQNRRIKWRKQSLEQQQAKLVKLGLVVIPVKSPGSQGLEEGDEEEEI
ESSDTGSEVDIDGLPDHC
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttccaaacagaccaacaagagtggacgcgtacgggtactccgccatgcgccat
tacgcatcgctctatgcacagcccaccggcagccagtgcgcagtggcgaccaagcctgcc
agcgggaagtccttcaccatcgatgctctgctcgccaagccggtggagacgcacagagac
tggacgagtcccaaaaaccaaaccgcaccgccactacttcccttccagacccagatgagc
tctgcgctgtcacagtacctctactcacccaagatgcagcacacgccggtacacagtcac
acacaacccggatactctatctattgttgcctgccgttctcttaccacgcgtcatgccgt
ggggcctttcaaaaacacgatacggttttaaaaggtctgtcaaagtcccactcattcaaa
ctcaagggagggaaatccaagcggatacgcaccagcttcaccaacgagcagttggatcgg
ctggagaaggagtttgcccggcagcagtacatggtcggctcggagaggttcctactggcg
tcgggtctgcagctcacagaggctcaggtcaaggtgtggttccagaatcgacgcattaaa
tggcgcaagcagagtctggagcagcagcaggccaagctggttaaactgggcctggtcgta
atcccagtgaagagtcctggttctcagggtctggaggagggagatgaggaggaggagatc
gagtcctcagacacaggatcagaagtggatatagatgggctccctgaccactgctga
DBGET
integrated database retrieval system
