Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384339
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Entry
139384339 CDS
T10872
Name
(RefSeq) transient receptor potential cation channel subfamily M member 7-like
KO
K04982
transient receptor potential cation channel subfamily M member 7 [EC:
2.7.11.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04217
Necroptosis
ocla04218
Cellular senescence
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139384339
04218 Cellular senescence
139384339
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139384339
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ocla01001
]
139384339
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139384339
Enzymes [BR:
ocla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
139384339
Protein kinases [BR:
ocla01001
]
Serine/threonine kinases: Other
Alpha family [OT]
139384339
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139384339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
Alpha_kinase
TRPM_tetra
LSDAT_prok
FtrD-like
Motif
Other DBs
NCBI-GeneID:
139384339
NCBI-ProteinID:
XP_070985147
LinkDB
All DBs
Position
26:complement(30763076..30843550)
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AA seq
1904 aa
AA seq
DB search
MSQKSWIESTFTKRECVHILPVSKDPHRCLPGCQICQQLVRCCCGRLVRQHAGFTASLAM
KYSDVNLGGGAEGGVQPELEEWAVDKHTQESPTDAYGIVNFQGGSHSYRAKYVRLSHDSR
PESILRLMLNEWQMELPKILISVHGGIQNFDLHPRIKQVVGKGLIKAAVTTGAWILTGGV
NTGVAKHVGDALKEHCSRSSRKICTIGVAPWGVIENRNDLIGRDVVAPYQTLLNPLSKLN
VLNNLHSHFLLVDDGTVGKYGAEVQLRRELEKHIQLQRIHARIGQGVPVVALIFEGGPNV
ILTVLEYLQETPPVPVVVCEGTGRAADILAYVHKQTEEGGGLPDGVEIEIIATIKKTFNF
SHSDAIHLFQTLMECMKSKELITVFHIGSEDHQDIDVAILRALLKGTNESAFDQLVLTLA
WDRVDIAKNHVFVYGQQLLVGSLEQAMLDALVMDRVEFVKLLIENGVSMHRFLTITRLEE
LYNTKQSPTNPTLFNLVRDVKQGNLPPNYKMTLIDIGLVIEYLMGGTYRCNYTRKRFRII
YNNLHGNSRRSGRHSAGPGSHLRKSQESFSIQADKKEKTRHNHFIKTAQPYKPKLESATD
QSKKKAKEEIVDIDDPETRRFPYPFNELLMWAVLMNRQKMSLFFWQHGEESMAKALVACK
LCRSMGYEAKKSDVVDDTSQELKDYSNEFGTLAVDLLEQSFRQDETMAMKLLTYELKNWS
NSTCLKLAVSSRLRPFVAHTCTQLLLSDMWMGRLNMRKNSWYKVILSILVPPAILLLEYK
TKAEMSHIPQSQDAHQMTMEDSEHNFHNTTDNIQMDVFQEAKADDNVEVKDEAETQVRSR
RLPLTRKFYAFYHAPIVKFWFNTLAYLGFLMLYSFVVLVRMPEFPSPQEWVVILYIFTSA
IEKIREMFMSEAGKISQKVKVWFSDYFNLSDFLAIVTFFVGFGLRIGGEDVLVPGRTVYC
LNIIFWYVRLLDILAVNQQAGPYVMMIGKMVANMFYIVVIMAVVLLSYGVPRKAILYPNE
EPSWTLLKDVVFQPYWMMYGEVYAYEIDVCANNTDTNVKSLCSTSVWITPFLQAVYLFVQ
YILIVNLLIAFFNNVYLQVMSISNLVWKYQRYHFVMAYHEKPVLPPPLILLSHLVSFFSC
ICHKRKKDSHSYGPKLFLTEEDQKKLHDFEEQCVETYFHEKNDQFHSGSDERIRLTSDRV
ETMCIQLKEVGNRVNFIKRSLHTLDSQIGHLQDLSALTVDTLKTLTAQRASEASKVHNQI
TRELSLSKNFAPSLAPTPQDPTPQSKGVKRSVGAYFGSSFPQVSGVVVGGNMADSLFGSG
VDPNPPLTLSPPERRGDWAGLGHQATAAIEAGSSTGGSASHSAFSLCPAPAPPTVSPPEL
RLRGHSFTQWQLTRPVQVGISDCPSSLPSVPSARAAFYVSSTPSQPSVSSHPELSLAGPD
KDRTSASTSAFAVEFGAFVGHKDNLHLDLQRSFPRDISSRQLSPATQPREQGHPEGQGNM
RTVNSYAGFTEFDRSPSFLHPDSSLSKRERSGVSAEDILIHEDPRAALLLERAQVKTAQA
SSLRAPGEDSGINAASCLYRHAHLGSRKDSIGSPFKPMESYQYSAVERNNLMRLSQSIPF
TPVPPRGEPVTVYRLEESSPNTINNSMSSWAHKGLCAKIEFLSKEEMGGGLRRALKVLCT
WSEYDILKPGHLYIVKSFLPEVVQTWQSIYKEDTVLLLCLREIQQQRAAQKLTFAFNQMR
PKTIPYSPRFLEVFLLYCHSAGQWFAIEECITGEFRKFNNNNGDEIVPTNLLEETMLAFS
HWTYEYTRGELLVLDLQGVGEILTDPSVIKSGEKGSYDMIFGPANLGDDAIRNFRAKHHC
NSCCRKLKLPDLKRNEYTPDKLMLPQDESHDPGSGTRHSMRLML
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaaatcctggatagaaagcactttcaccaagagggaatgtgtccacatactt
ccagtgtcgaaagacccccacagatgccttccaggatgtcagatctgccagcagttggtg
agatgctgctgtggtcggctggtacggcagcatgctgggtttacagccagcctggccatg
aagtactcagacgtgaacttgggtgggggggcagagggtggggtgcagccggagttggag
gagtgggctgtggacaaacacacacaggagagccctacagacgcttacggcatcgttaac
ttccagggagggtcgcactcttacagagccaagtatgtgcgtctgtcccatgacagcagg
ccagagagcatcctgaggctgatgctgaatgagtggcagatggagcttcctaagatcctc
atctctgtccacggaggcatccagaactttgacctgcacccccgaatcaaacaggtggtg
gggaagggcctgatcaaagctgctgtcaccaccggggcatggatcctgacaggaggggtt
aacacaggtgttgccaaacatgtgggtgatgcgttgaaggagcactgttctagatcgtca
aggaagatctgtacaattggagtcgctccctggggcgtcattgagaaccgcaatgacctc
atcgggagagacgttgtagccccctaccagacgttgctgaaccccctgtccaagctcaac
gtgttgaacaacctccactcccacttcctgctggtggatgatgggacggtggggaagtac
ggagctgaggtccaactacgccgcgagctggaaaaacacatccaactgcagaggatacac
gcacgaattggtcagggtgttcctgtggtagcgttgatatttgaggggggtcccaacgta
atcctgacagtgttggagtaccttcaggagactccacctgttcctgtggtggtctgtgag
gggactgggcgtgctgctgacatactggcctacgtccacaaacagactgaggaggggggg
ggtctacctgacggtgtggagatagaaatcatcgctacgatcaaaaagacgttcaacttc
agccacagcgatgctatacacctcttccagacccttatggaatgtatgaagagcaaagaa
ctgatcacggtgtttcatatcggctctgaggaccaccaggatattgacgtggccatactg
agggcattactgaaaggcaccaatgagtctgcgtttgaccagctggttctgactctggcc
tgggaccgggtggacatcgccaagaaccatgtgtttgtctacggacagcagctactggtg
ggttcgttggagcaggccatgctggatgccttagtgatggaccgtgtggagtttgtgaag
ctcctgattgagaatggagttagcatgcacaggttccttaccatcacacggctggaggag
ctatacaacacgaaacagtcccctaccaatcccacgctcttcaacctcgtaagggatgtc
aaacagggtaatctcccccctaactacaagatgaccttaattgacattggcctggtgata
gagtacctgatgggcgggacttacaggtgcaactacaccaggaaacgcttcaggatcatc
tacaacaatctccatggcaacagcaggaggtcaggtcgccactctgcagggcctgggtcc
cacctgaggaagagccaagagtcgttcagtatccaggccgacaagaaggagaagaccagg
cacaaccacttcatcaagactgcacagccatacaaacccaagttggagtcggcgacagac
cagtccaagaaaaaagccaaggaggagatagttgacatcgatgacccagagacacgcagg
ttcccgtacccgttcaatgagctgctgatgtgggccgtcctgatgaataggcagaagatg
tctctgttcttctggcagcatggggaggaaagcatggccaaggccctggtggcctgtaaa
ctctgtcgctccatgggctatgaggccaagaagagtgacgtggtcgacgacacctcccag
gaactcaaggactactccaatgaatttggcaccctagcagtggacctcctggagcagtca
ttcagacaggatgaaaccatggcgatgaaactgctgacctacgaactgaagaactggagt
aacagcacctgtctgaagctggccgtgtcgtcgcggttacgacccttcgtggctcacacc
tgtacccagctgctgctgtcagacatgtggatgggacgactcaacatgaggaagaactcc
tggtacaaggtgatcctcagtatcctggtgcctcctgcaatcctcctgttggagtacaag
acaaaggcagagatgtcccacatccctcagagtcaggacgcccatcagatgaccatggag
gacagcgaacacaacttccataacaccaccgacaacatacagatggatgtgttccaggag
gcgaaggcggatgacaacgtggaggtgaaggatgaggcggagacacaggtccgctcccga
agacttcctctaaccaggaagttctacgccttctaccacgcccccatcgtcaaattctgg
ttcaacacgctggcgtacctgggttttctgatgctttactcatttgtcgttctggtccgg
atgcccgagtttccgtctcctcaagagtgggtggtcatcctctacatatttacctccgcc
attgagaagatacgagagatgtttatgtctgaagctgggaagattagccagaaggttaaa
gtctggttcagtgactattttaacctctcagacttcctggctattgtcaccttctttgtg
ggctttggattgaggatcggaggagaggatgtgcttgtcccaggccggactgtgtattgc
ttgaatatcatcttctggtacgtgagactcctagatattctggcagtcaaccagcaagca
ggaccgtatgtgatgatgatcggtaaaatggtggccaatatgttttatattgtggtgatc
atggcggtggtgttgttgagttatggcgtgccgcggaaagccatcctgtacccaaatgag
gagcccagttggacgctgctcaaagatgtggtcttccagccgtactggatgatgtacggg
gaagtgtatgcgtatgaaattgacgtgtgtgccaataatactgatacgaatgtgaaatcc
ctgtgctccacttcagtgtggatcactcctttcctacaagcagtctacctctttgtccaa
tacatattgatagttaaccttctcatcgccttcttcaataatgtgtacctccaagtgatg
tcaatcagtaatctggtatggaagtaccagaggtatcatttcgtcatggcctaccatgag
aagccagtcctccctcctcccctcatcctcctctcccacctagtctctttcttctcctgc
atctgtcacaagaggaagaaggacagtcactcttacggaccaaagttgtttctaacggag
gaggatcagaagaagctccatgactttgaggagcagtgtgtggagacgtacttccatgag
aaaaacgaccagttccactcagggagcgatgagcgcatccgcctcacatcagacagggtt
gagaccatgtgtatccagctgaaggaggtcggtaatagagtgaacttcatcaagcgttcc
ctccacacgctggactctcagatcggccaccttcaggacctgtcagctctgaccgtggac
accctgaagaccctgaccgcccagagggcctctgaagccagcaaggtccacaaccagatc
accagggagctcagtctgtccaaaaactttgcccccagcctggcccccaccccccaggac
cctaccccccaatccaagggggtaaaacgcagcgtgggcgcctacttcggttcctccttc
ccccaggtgtccggggtggtggtggggggcaacatggctgattctctgtttgggagtggg
gtggacccaaacccgccactgacgctcagtcccccagagcggagaggagactgggctggg
ctggggcaccaagctactgctgctatagaggctggatcctccacgggtggcagtgctagt
cacagtgccttctccctctgcccagctccggcgccccctactgtcagtcctccagagctg
cggctacgcggccactccttcacccagtggcagctgacccgtccagtgcaggtgggcatc
tccgactgcccctccagcctgcccagcgtgccctctgctagggctgctttctacgtcagc
tctaccccctcccagccctcggtctccagccacccagaactcagcctggctgggccagac
aaagacagaacctctgcttccacctctgcctttgctgtagagtttggtgcgtttgttggt
cataaagacaaccttcacctggacctgcagcgctccttccccagagacatctcctccaga
cagctcagcccagccacgcagcccagggaacagggtcatcctgaaggccaaggtaatatg
aggacggtcaactcatatgctggcttcactgagtttgaccggagtccctccttcctccat
ccagactcctctctcagtaagcgagagaggagcggcgtgtcagcggaagacatcctcatc
cacgaagaccccagagctgcactactactggagagggctcaggtcaagacagctcaggcc
agcagtctcagggcaccaggggaggactcaggtataaatgctgcatcatgtctctacaga
cacgcccatctggggagcaggaaggattcaattggttcccctttcaagccaatggaaagc
taccaatactcggctgtggagcgtaacaacctgatgaggctgtctcagagcatccccttc
accccagtgccccctagaggtgagccagtaacagtgtatcgtctggaggagagttctccc
aacaccatcaacaacagcatgtcctcctgggctcacaaaggtctctgtgccaagatagag
ttcctcagtaaggaggagatgggaggggggctgcgacgtgcactcaaggtgctgtgtacg
tggtcggagtatgacattctgaagccaggtcacctgtatatcgttaagtccttcctacca
gaggtggtccagacctggcagagcatctacaaggaggacactgtactgctgctctgtctc
agggaaattcaacagcagagagctgctcagaaactgacatttgccttcaaccaaatgagg
cccaagacaatcccttactctcccaggtttctggaggtgtttctgttgtactgtcactca
gcaggccaatggttcgctatagaggagtgtattactggagagttcaggaagtttaacaat
aacaatggggacgagattgtcccaaccaaccttctggaggagaccatgctggccttcagc
cactggacatatgagtacacccggggagagctgttagtgctggacctacaaggagtgggg
gagattctgactgatccgtctgtcataaagagtggagagaaggggtcatatgacatgata
tttggtcctgccaacctgggagatgacgccatcagaaacttccgggccaaacaccactgc
aactcttgctgcaggaaactcaaacttcccgatctgaagcggaacgagtacacgccggac
aaactgatgctgcctcaggacgaatcacacgaccccggaagcgggacccgccattcaatg
aggctcatgctctga
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integrated database retrieval system
