Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384355
Help
Entry
139384355 CDS
T10872
Name
(RefSeq) transcription factor 12-like
KO
K15603
transcription factor 4/12
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139384355
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
139384355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
139384355
NCBI-ProteinID:
XP_070985163
LinkDB
All DBs
Position
26:complement(18635628..18731535)
Genome browser
AA seq
695 aa
AA seq
DB search
MNPQQRVAAIGTDKELSDLLDFSAMFSPPVNSGKNRPTTLGSSQFSAPGMDERPSQASSS
WAPGGQSSSPSYESSRGLADSPHYGDHMSDSRLVSHEGLSQTPFMNSSIMGKSAARAQFP
AYGREPGVSGCQTNLRPDIGLVSPGPVTTSGKTAPPFYPPFTGANPRRRPLPEPTPIDPL
QTKKVRKVPPGLPSSVYAPSPNTEDFNRDSPSYSSPKPPSSMFATTFFDGTHNSSDPWNS
SNGINQPSYGGMLGGSSSHMPQSGNYVNMHSHDRQNYPPHSVSPTDIHASLPPMSSFHRS
NASTSPFVNPTHNPPVNTTDGVMVAANRGNASGSQQTGDALGKALASIYSPDHTSSSFPS
NPSTPVGSPSPLTCTAGAAASAGTNQWSRGAAGQSSSSPNYENSLHSLSRMEDRLDRLDD
AILVLRNHAVGSTTSLPSDIHSLLGQNGPIAALGANFPAAGLVASRTAAMGGSHRDEAGS
LINSHGGPPSVGSMSNMSSMSTAELNHQVETFRGLAAGLAGQVAAALELKVENQDRDDMH
DGHSSDDLGSGDESDKRDIKTPRGGTRTSSINEDDDNLNPEQKAERERERRMANNARERL
RVRDINEAFKELGRMVQLHLKSEKPQTKLLILHQAVAVILSLEQQVRERNLNPKAACLKR
REEEKVSGHGISGDQQAHHGVHPGLTDTSNPMGRL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcaacagcgggttgccgctatcggaacagacaaggaattgagtgatttactg
gattttagcgcgatgttttctccacccgtaaatagtgggaaaaacaggccaaccaccctt
ggaagcagccagttcagtgcaccaggtatggatgagaggccgagccaggcatcgtcctcc
tgggccccaggtggccagtcgtccagtccctcctacgagtcctccaggggtttggcagac
agccctcattatggtgatcacatgagtgacagtcgattagtgtcccatgaaggattgtcc
cagacaccttttatgaactccagcataatgggtaaatcagcagcgagggctcaatttcca
gcctatgggagagagcctggcgtgtctggctgccagaccaatctgcggccggacattggt
ttggtgagtcctgggcctgtgaccacatcggggaaaacggcccctcccttctaccctccc
ttcacaggggccaaccccagaagacgccccctaccggaacctactcccattgatcctcta
caaacaaagaaagttcgcaaggtccctcctggtctgccttcatctgtgtatgccccttct
cccaacacagaagacttcaacagagattctccctcctactcatctcccaaaccccccagc
agtatgtttgcaaccactttctttgatgggacccacaactcttctgatccgtggaattcc
tccaatgggatcaaccagcctagttatggaggaatgctgggaggatcttcatctcacatg
ccgcagtcaggaaattacgtcaacatgcactcacatgaccgccagaattaccctccacac
tctgtgtcgccgacagacatccatgccagtcttcctccaatgtccagcttccaccgcagc
aacgccagcacttcaccattcgttaacccaacacacaacccgcctgtcaacaccaccgac
ggggtcatggttgctgcaaatcgagggaatgcctctggaagccagcagactggagatgca
ctgggcaaagccttggcttcgatttactcacctgaccacaccagcagtagttttccatcc
aacccctccacccctgtaggatctccgtcgcccctgacttgcacagcaggtgctgctgcc
tcagcaggtaccaaccaatggtcccgtggtgcagccgggcagagctcctcctcgcccaac
tatgagaactccctgcactcactgtctcggatggaggatcgcctggacagactggatgat
gccatcctcgtcctgcggaaccatgccgtgggctccaccaccagtctgcccagcgacata
cacagcctgctgggacagaacgggccaatagcagccctcggagcaaacttccctgccgct
ggattggttgctagtcggacagcagcaatgggtggttctcaccgggatgaggctggcagt
ttgatcaacagtcacggagggccgcccagcgtgggctccatgtccaacatgtccagcatg
tccaccgctgaactcaaccaccaagtggaaaccttcagaggtctggctgcaggtctggct
ggtcaggtggctgcagccctggagctgaaggtagagaaccaggacagagatgacatgcat
gatggccactcctccgacgacctcggctccggagacgaaagcgacaagagggacatcaag
actcccagaggaggcacacggacaagcagcatcaatgaggatgatgacaacctgaaccca
gagcagaaggctgagcgggagcgcgagaggaggatggccaacaacgcccgcgaacgcctg
agggtgcgagacatcaacgaggctttcaaggagctgggccgcatggttcagctgcacctg
aagagcgagaagccccagaccaagttgctcatcctgcaccaggctgtggcagtcatactg
agcctggagcaacaagtcagagagcggaatctgaaccccaaagcagcctgccttaagagg
agggaagaggagaaggtgtctggccatgggatctctggggaccagcaggcccaccatggg
gtccaccccggcctcaccgacacatccaaccccatgggccgactctga
DBGET
integrated database retrieval system
