Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384361
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Entry
139384361 CDS
T10872
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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GFIT
Motif
Pfam:
Sema
PSI
ArfB
Motif
Other DBs
NCBI-GeneID:
139384361
NCBI-ProteinID:
XP_070985168
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Position
26:complement(30977353..31019167)
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AA seq
1146 aa
AA seq
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MVWRAGLLLSILLATATHTMSASFPEDSIPLDVVDAHFSRQYPVFRGRLSGNESQHRLDF
QLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGEADRKNCAMKGKHRDECH
NYIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFA
DGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFYRE
IAAEHNNLGKAVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQS
ITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMDDIEKVFRGRFKEQKTPDSVWTAFPE
ERLPKPRPGCCAGHGQAESYKTSIEFPDETLLFIKSHPLMDSSVPNIGDEPWFTKTRVRY
RLTALAVDNAAGPHGNYTVLFIGSEAGVVLKVLAKTSPLSLNDSILLEEIDLFNRAKCLS
NSEDDRHILSLHVDRDTHSVYVAFSSCVVRMPLSRCERHTNCHKSCIASRDPYCGWMPHG
ACERILPGVLSGYEQDVEFGNTVQLGDCHVFLATTSATDYKSFGDPTSDMELSSTSFTDQ
PSGPIHPPVPPVLTPTLSPHPGLGPGEGPGLGPGAGFPDLYGSGFVQQDDPATSHSLESL
PGGLEGVWEIQAGEANQMVHMNILISCVLAAFLLGALVAGLVVFCYRDSFHKPRHAHKDA
ESAPSCSDSTGSFAKLNGLFDSPVKEYQPSLDCPKLYTNLLSSGKDLTPNGDTKTMILRD
GCQPPELAALPTPESTPVLQQKGLQPIRNQWERANHHGKINGSRKNSNSTSSSIAKSPQF
HPSSPPPHPQPHPHPALGHSHIPSAVVLPNATHEYSSGYHGNPTDDVTPPRTLDRKPENM
EHLQATPPHSKGSRKEQKRSLDARNTLNDLLKHLNDANTANASSKAILQEGVGSAPRPSR
QHLMLEPLGDITEVPPKVPSREASLYSPSSSSSLPRHSPTKRVDVPLPSTPSSPTGSLGM
GGSMSGTLERRYGSHHRISSHRHSLTATSPNGVSMGVSLSHQHSMNRGGYMPPTPPSRLD
SQRGLHSPHQHPHPPSLSRQSSYSGHGSLPRQGLKRTPSLKPDVPPKPNAFTPQTPQMRV
VNKYSY
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggtttggagagcaggccttctgctcagcatactgctagctacagccacacacaccatg
tctgccagcttcccagaggacagtatacccctggacgttgtcgatgcacacttctcgcgg
cagtacccagtgttccgaggtcgtctgtcagggaacgagtcacagcacagactggacttc
caactgatgaccaagatacaggatacactgttcatcgctggcagagaccaggtgtatcta
gtgagtctccgggaatcctacaggaatgagatcattccctacaggaagttaacatggagg
tcaggcgaggcagacagaaagaactgtgccatgaaggggaaacacagagatgagtgtcat
aactacatcaaggttctggttcccagaaatgatgacctggtgttcatctgtggaacaaac
ggcttcaaccccatgtgccgatactacaggctggataacctggagtttgatggggaggaa
atcagcggactggcacgatgcccgtttgacgccaagcagaccaatgtcgctctgttcgct
gacgggaagctgtactcggcaacggttgctgacttcctggcgagcgacgcagtgatctac
cgtagtatgggtgacggctcggccctcaggactatcaaatacgactccaaatggctgaaa
gagccccatttcctgcatgcagtggattatgggaactatgtctacttcttctacagagag
atcgcagcagaacacaacaacttgggcaaggccgtctactccagagtggctcgtatctgt
aagaacgacgtaggcgggtctcagcgtgtgttggagaaacactggacgtccttcgtcaag
gccagactcaactgttctgttcctggagaatcgttcttctacttcgatgttctacagtcc
atcactgacatcatcaacatcaacggagttccttctgtggtgggagtcttcactacacag
atgaacagtatcccagggtctgcagtgtgtgcgttctccatggatgacatagagaaggtg
ttcagaggacgatttaaagaacagaaaacacctgactctgtctggaccgccttcccagag
gagagactgcccaaacccaggccaggctgctgtgcgggtcacggccaggctgagtcctat
aagacctctatagagttccctgatgagaccctcctcttcatcaagtctcaccccctcatg
gactcctccgtgcctaacataggagatgagccctggttcaccaagacacgcgtcaggtac
aggctgacagccctggcggtggacaacgcggctggtccacatggtaactacacggtgctg
ttcattggttcagaggcgggcgtggtgctgaaggttctagccaagacttcccctctgtcc
ctaaacgacagcatcctattggaggagattgacctgttcaacagagccaagtgtctgtct
aacagtgaggatgacaggcatattttgtcgctccatgttgacagagacacacacagtgtg
tatgtagctttctctagctgtgtggttcgcatgcctctcagccgctgtgagcgacacact
aactgccacaagtcttgtatagcgtccagggacccctactgtggctggatgcctcatgga
gcctgtgagaggatcctgcctggagttctgtctggttatgagcaggatgtagagtttggg
aacacggttcagctgggagactgccatgtgtttttggccactacatcagcgacagattac
aaatcatttggtgacccgacctctgacatggagttgtcatctacgtcattcacagaccag
cccagtgggcccatacaccccccagtacccccagtactcacccccaccctgagcccccat
cctgggcttggtcctggggaagggcctgggttggggcctggggctggttttccagacctg
tatggctcagggtttgtgcagcaggatgacccggccacctcccattcactagagtcactc
ccagggggcctagagggtgtgtgggagatccaggcgggagaagccaatcagatggtccac
atgaatatcctgatcagctgtgtgttggctgccttcctcctgggggcgctagtggccggc
ctggtggtgttctgctacagagactccttccacaagccccggcacgcccacaaagatgca
gagtcagccccctcctgcagcgactccaccggatccttcgctaagctcaacgggctcttc
gacagtcctgtcaaggagtaccagccaagtctggactgtcccaagctgtacaccaactta
ctgagcagtggtaaggacctgacgcctaacggagacaccaagaccatgatcctccgggac
ggctgtcagccccccgagctggccgccctgcccacccccgagtctacccctgtgctgcag
cagaaaggcctgcagccaatcaggaaccaatgggagcgagccaatcaccacgggaagatc
aacggatccaggaagaactccaactctacctcctcctccattgccaagagtccccagttc
caccccagttccccccctcctcacccccagccccacccccaccctgcgctgggacactcc
cacatccccagcgccgtcgtccttcccaacgccacgcacgaatacagcagtggttaccat
ggaaacccgaccgacgacgtcacaccgccgcgcaccctggacaggaagccagagaacatg
gaacacctgcaggccacgccccctcattctaaagggagcagaaaggagcagaagaggtcg
ctggatgccaggaacacactgaacgacctgctgaagcacctgaacgatgctaacacggct
aatgctagctccaaggctatcctccaagagggggtcggctcagcaccccgacccagcaga
caacacctgatgctggagcctctaggggacatcactgaggttccccccaaggtccccagc
cgagaggcctctctttactccccctcctcctcctcctccctgcccaggcacagccccacc
aagagggttgacgtcccactgccctccacccctagctcccccacaggcagcctgggtatg
ggaggaagcatgagcggcaccctggagaggaggtacggctctcatcacaggatctcttct
cacagacactccctcaccgccacctctcccaacggggtcagtatgggggtgtcgttgtcc
caccaacacagtatgaacagaggggggtacatgccccccacccctccctccagactggac
tcccagagggggcttcactccccccatcaacacccccaccccccctccctgtcccgccag
agcagctacagtgggcacggctcgctcccccgccaggggcttaaacggaccccgtcccta
aagcctgacgtcccccctaaacccaacgccttcaccccacagactcctcagatgagggtg
gtcaacaagtacagctactag
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