Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384368
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Entry
139384368 CDS
T10872
Name
(RefSeq) cadherin-11-like
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139384368
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Major cadherins
139384368
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_pro
ASFV_J13L
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
139384368
NCBI-ProteinID:
XP_070985186
LinkDB
All DBs
Position
26:9007262..9091216
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AA seq
796 aa
AA seq
DB search
MWEGLGLQVFLMCLGAVLCSAVAASAPLEHSHRRRLSLHRHRERTGKEGQVLHRSKRGWV
WNQFFVIEEYTGPDPVLVGRLHSDVDAGDGNCKYILSGEGAGTIFVIDDKTGNIHATKTL
DREEQAQYTLTAQAVDRATNKPLEPPSEFIVKVQDINDNPPEFLHGPYYARVPEMSNVGT
SVMQVTATDADDPTYGNSARLVYSILQGQPYFSVEPQTGIIRTALPNMDREARQEYDVVI
QAKDMGGHMGGLSGTTEVKITLTDVNDNPPKFPQSVYSMSVSEDKVSGEEVGRLKAKDPD
LGENGLVSYRFIEGDGMTVFEITTDTDTREGVIKLRKPVDFETKRAYTLRVEASNTHVDP
RFIAWGPYKDTATVKVMVEDADEPPAFLATSYSFEVEENAHDGTVVGRVHAKDTDVANNP
VRYMIPRYTDVEQFFSVGPEDGIIKTTRPLDRETLPWHNISVSATEIGGHHQDTKVRVNI
RVKDMNDNAPEFATQNEILVCENASPGKLIETVSAVDKDEMAHRQYFHFSIAPEAVNNHN
FSLKDNRDSTASIYVTRRGFSRMTQDVYFLPIEINDNGIPPMSSTNTLTIRVCSCDSKDT
ILSCNVEPYILPAGLSTGALIAILACIVILLAIVVLFVALRRQKKEPLIVFEEEDIRENI
ITYDDEGGGEEDTEAFDIATLQNPDGANGFLPRKDIKPELQYPMRPGGHPVANTVDVDDF
IKTRINDADSDPTAPPYDSIQIYGYEGRGSIAGSLSSLESVTTDSDLDYDYLQSWGPRFK
KLADLYGTKDSADDNS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtgggagggactgggactgcaggtgttcctgatgtgcctgggcgccgtgctgtgcagc
gctgtggccgcctcggcacccctggagcacagccaccgccgccgcctctccctacacagg
caccgggagaggacaggcaaggagggacaggtcctacaccgctccaagagaggctgggtc
tggaaccagttctttgtcattgaggagtacacagggccagacccagtgttagtgggcagg
ctccactcagacgttgatgctggggatggcaattgcaagtacattctctcaggggagggt
gcaggcaccatttttgtcattgatgacaagacaggcaacatccatgccaccaagaccctg
gacagggaagagcaggcccagtacaccctcacagcccaggctgtggacagggccaccaac
aagcctctggagcctccgtctgagttcatagtcaaggtccaggacatcaatgacaaccca
cctgagttcctacatgggccatactacgccagggtgcctgaaatgtccaacgttggtacc
tcagtgatgcaggtaacagccacagatgctgatgatcccacctatgggaatagtgccaga
ctggtgtacagcattctccagggccagccctacttctcagtggaaccacaaacagggata
atccggactgctctgcccaacatggacagggaagctcggcaggaatatgacgtcgtcatc
caagcaaaggacatggggggacacatggggggattgtcagggacaacagaagttaaaatc
accttgacggacgtcaacgacaacccacccaagttccctcagagtgtatactccatgtca
gtttcagaggacaaggtttcgggtgaggaggtgggccgtctgaaggctaaagatccagac
ctgggcgagaatggacttgtgtcatatcgtttcatcgagggcgatgggatgactgtgttt
gagattaccaccgacactgacacccgcgagggtgtcatcaaactgagaaagcctgtggac
tttgagactaagagggcatacaccctgagagtagaggcatccaatacacacgtggacccc
cgcttcatcgcctggggaccctacaaagacacagccacggttaaggtaatggtagaggac
gcagacgagccgcctgctttcctggcaactagctacagcttcgaggtggaggagaatgcc
cacgatgggaccgtggtgggccgtgtacacgctaaagacacagacgtggccaacaaccct
gtcaggtacatgattccacgctacacggacgtggagcagttcttcagtgtcggcccggag
gatggcatcatcaagaccaccagaccgctggaccgggagacactaccctggcacaacatc
tctgtcagcgccactgagattgggggacatcaccaagatacaaaagtgcgtgtcaacatc
agagtcaaagatatgaatgacaacgcccctgagtttgccacacagaacgaaatccttgtg
tgtgaaaatgcctcccctggcaaactcatagagacagtcagtgcggtggacaaggatgag
atggcccaccgacagtacttccacttcagcatcgccccagaggctgtcaacaaccacaac
ttctccctgaaagacaacagagacagcacagccagcatatatgtgacccggaggggcttc
agccggatgacccaggatgtctacttccttcccattgagatcaacgacaacggcatccct
cccatgagcagcaccaacacgctgaccattcgagtgtgcagctgtgacagtaaggacacc
atcctgtcctgcaacgtggagccttacatcctgcctgcaggcctcagcaccggagctctc
atcgccatactcgcctgtatcgtcattctcctggcgatcgtggtgctgtttgtggcactg
cgtcgtcagaagaaggagccactcatcgtcttcgaggaggaagacatccgtgagaacatc
atcacctatgatgatgaaggcggtggagaggaggacacagaggccttcgacattgctaca
ctacagaaccctgacggtgccaacggcttcctaccccgtaaggacatcaagcctgagctc
cagtacccgatgaggcctggcgggcaccccgtggccaacactgtggacgtggatgatttc
atcaagacccgcattaacgacgcggacagcgaccccacggcccctccctatgactccatc
cagatctatggctatgagggccggggctccatcgctggatccctcagctccctggaatcg
gtgaccacagattcagacctagactacgactacctccaaagctggggcccgcgcttcaag
aagctggccgacctttacggcaccaaagactccgccgatgacaactcttaa
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