Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384403
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Entry
139384403 CDS
T10872
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139384403
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139384403
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
139384403
NCBI-ProteinID:
XP_070985259
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Position
26:complement(34211013..34307948)
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AA seq
734 aa
AA seq
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MATPAAVNPSEMGSELPGPVTMPGAVVGAGQVRMGGAMPGRGGKRRSGGMDFDDEDGEGP
SKFSRYDDDDQIPGDDKERYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKL
TILRMAVSHMKSMRGTGNTSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYV
SDSVTPVLNHPQSEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQ
QSSMRMCMGSRRSFICRMRCGSTPLDHISLNRLSNMRKRYRNGLGPSKEGEDQYSVVHCT
GYIKAWPPAGMTIPEEDTEAGQTSKYCLVAIGRLQVTSSPVSMDMNGLTVPTEFLSRHNS
DGIITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRF
RMKNREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQQAELEVHQRDGLTAYDLS
QVPVPSVGGGVHEAGKNTDKTDTMFSQERDPRFADMYSGISGSGEKKMMVPSSTAGGQQL
YSQNSPFQPGHSAKSFSSSVIHVPGVNDIQPSGSSNQNLAQISRQLNPGQVAWTGNRPPF
SGQSTKAQSSPFGIGSGHSYQGDPSSYSPLSSPATSSPSGNAYSGLANRSTAFDVSGEGS
QSGGQFQGRPSEVWSQWQNQHHGQQGGEPHSHPNPSQTEVFQDMLPMAGDPTQGTANYNI
EDFADLGMFPPFSE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccgccgcggtcaatccatcggagatgggcagtgagttgccggggcccgtt
actatgccgggggcggtggtgggggcgggccaagtgaggatgggcggagccatgccgggc
cgcgggggcaagaggagatctggagggatggactttgatgacgaggatggggaaggacca
agtaaattttcaaggtatgatgatgatgatcagatacctggtgatgataaggagagatat
gccagagagaaccacagcgagatagagcggcgtcgccgtaacaagatgacccagtacatc
acggagctgtcggacatggtgcccacctgcagcgctctggcccgcaagccagacaaactg
actatcctccgcatggccgtgtcccacatgaagtccatgagagggaccgggaacacgtcc
actgacggggcgtacaagccctccttcctgaccgaacaggagttgaagcacctcatcctg
gaggcggccgacggcttcctgtttgtggtcgccgcggagacgggccgcgtgatctacgtg
tctgactcggtgacgccggtgctcaaccacccgcagtcggagtggtttggcagcacgctg
tatgaacaggtgcatcctgacgacgtggacaagttgcgggaacagctcagcacctcagag
aattccatgacagggcgtatcctggacctgaagacaggaacagtgaagaaagaggggcaa
cagtcgtctatgaggatgtgcatgggctccagacgatccttcatctgcagaatgagatgt
ggcagcaccccactggaccacatctctctcaaccgactgtccaacatgaggaagagatac
aggaacggtctgggaccctcgaaggagggagaggatcagtactctgtggtgcactgtacc
ggctacatcaaagcatggcccccagcaggtatgaccataccagaagaagacacagaggca
ggacagaccagtaaatactgccttgtagccatcggaaggctgcaggtgaccagttctccc
gtttccatggatatgaacggcctgacggttcccactgagttcctgtcgcgccacaactcc
gacggcatcatcactttcgtggacccgcggtgtatcaacgtgattggataccagcctcag
gatctgttggggaaagacatcctggagttctgtcacccagaggaccagagtcacctgaga
gagagctttcaacaggtggtaaagttgaaaggccaggtgctgtctgtaatgtacaggttt
cgtatgaagaacagagagtggatgttaatccgcaccagctccttcaccttccagaacccc
tactccgatgagatcgagtacatcatctgtaccaacaccaacgtcaagcagctccaacag
cagcagcaggcagagctggaggtccatcagagagacggcctgacagcctacgacctatca
caggtgcccgttcccagtgtgggaggaggggttcacgaggcgggcaagaacactgacaag
acggacaccatgttctcacaggagagagacccacgctttgctgacatgtactccggcatc
tctggctctggtgagaagaagatgatggttccttcgtctacagcgggaggtcagcagctc
tactcccagaactctcccttccagccaggacactctgccaagagcttcagctcctcagtg
atccatgtcccgggggtgaacgatatccagccgtcgggatcgtccaatcagaacctagct
cagatctccagacagctcaacccaggacaggtggcctggactggcaacagacccccgttc
tctggccagtccactaaggcccagtccagtccgtttgggataggctccggccacagttac
caaggagacccatcttcctatagccccctgtcctcccctgccacctcatcgcccagcggc
aatgcctactctggactggctaaccggagcacggcgttcgatgtgtcaggagagggcagt
cagagtgggggtcagttccagggtcggcccagtgaggtctggtcccaatggcagaaccag
caccatggccaacagggaggagagccacactctcaccccaacccttcccagacagaggtg
ttccaggacatgttgccgatggcaggagacccaacacaaggaacagccaactacaacatt
gaagactttgctgatctgggcatgttccctcccttctccgagtag
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