Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384417
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Entry
139384417 CDS
T10872
Name
(RefSeq) 26S proteasome regulatory subunit 6A-B-like isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139384417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139384417
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
139384417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
AAA_5
RuvB_N
AAA_16
AAA_22
AAA_2
DUF5827
DUF815
Mg_chelatase
AAA_33
PhoH
Sigma54_activat
IstB_IS21
NPHP3_N
AAA_7
AAA_24
TIP49
ATPase
AAA_28
AAA_14
Dsl1_C
AAA_11
RNA_helicase
Parvo_NS1
Defensin
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
139384417
NCBI-ProteinID:
XP_070985280
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All DBs
Position
26:8054249..8064245
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AA seq
427 aa
AA seq
DB search
MASLNDRSVWDEVEDGIGKDVLNMSPEEIVQRTRLLDNEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQAY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDSRVKAMEVDERPAEQYSDIGGLD
KQIKELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFNLAKEKAPSIIFIDELDAIGTKRFDSEKSGDREVQRTMLE
LLNQLDGFQSKMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAACVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcactgaatgacagatcagtttgggatgaggtggaggatgggatcggcaaagac
gtcctcaacatgtcccctgaagagatcgttcagcggacacgtcttctggacaatgaaata
aagatcatgaagagtgaggtattgagggtaacccatgagctgcaggccatgaaggacaag
atcaaagaaaacacagagaagatcaaagtgaacaagaccctgccatacctggtctccaat
gtcattgagcttctggatgtggacccaaatgaccaggaggaggatggagcaaatatagat
ctagattcccagaggaagggcaaatgtgctgtcatcaaaacatctacaagacaggcatac
ttcctcccggtcattggcttggtggatgcagagaaactgaagccgggagacctcgtgggg
gtaaacaaggactcatacctgatcctggaaaccctgcccgcggagtacgactccagagtc
aaagccatggaggtggacgagcgccctgctgaacagtacagtgacattgggggattagac
aaacagatcaaggagctggtggaagcaattgttctacccatgaaccacaaggagaagttt
gagaacctgggtattcagccacctaagggggttttgatgtatggccccccaggcacaggg
aaaaccctactggctagggcctgtgctgcccagaccaaggccacattcctcaagttggct
ggcccacagctggtccagatgttcattggtgatggtgccaagctggtccgagacgccttt
aacctagccaaggagaaggccccctccatcatcttcatagacgagctggacgccattgga
accaaacggtttgacagtgagaaatcaggtgacagggaggtacagagaactatgcttgag
ctcctcaaccagctggacgggttccagtccaagatgcaagttaaggttattgctgccact
aacagggtggatatcctagatcccgcactgctgcgttctggacgtctggaccgtaagatt
gagttcccaatgcccaatgaggaagcacgagcccgcatcatgcagattcactcacgcaag
atgaacgtcagccctgatgtcaactacgaggagctggccaggtgcactgatgacttcaac
ggcgcccagtgcaaagcagcgtgtgtggaggcgggtatgatcgcccttcgcaggggggca
actgagctcaatcatgaggactacatggaaggcatcttggaagtacaagctaaaaagaag
gccaacctgcagtactacgcctaa
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