Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384446
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Entry
139384446 CDS
T10872
Name
(RefSeq) two pore channel protein 2 isoform X1
KO
K14077
two pore calcium channel protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139384446
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
139384446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139384446
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
139384446
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Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
139384446
NCBI-ProteinID:
XP_070985313
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Position
26:12413950..12427154
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AA seq
766 aa
AA seq
DB search
MESEPLLTGSINYGSHPDNNDHLEKGSPKTRRLSYSVAAEYCCVGGGDVDLYLQQAVVFI
EDAIQYRSINHRVDTNSLRLYRWYYSRLWQWGLGLTIAVVLMLAFIERPSSFSYTSDPRF
RPPPWEPPCGLTEGIEIVCLIIFAIDLTTKSYLIGWDEFRKCKWLIVYILAVSASVIDWT
LTLSMYCDQNLRVRRLIRPFFLLQNSSLMKKTLKCIKRTLPEIASVILLLALHLCLFTMI
GMLLFAKGENPKHNGEWETYFRDLPTSLSSLLVLLTTANNPDVMIPAYSLNRGYSIFFIL
FSGFGTYFLMNLLTAIIYNQFRGYLLMSVQASILRRRLGVRAAFEVMSCQGRGQDATHSE
EHVERVRVDASLQVMARVQMKSYYRQAIIKRLQQLSDGFIQWEAFRGLFDELDKDRIKEH
PPKPEYNSPLLQKLQLVFSHYYVMIVGNAVALANVMCICTILVLDSEKSMAERDDYYMEV
INCFFILYYLMEMSLKILAFGWRGYLSYRNNIFDGLLTFCLLVLQITIFATYRLPFPKWN
PASRGLMSLWEMVRLVNMLIVVRFLRIIPDIKLMALVASTLVDLVKNLRAFAGILVVVFY
VFAVLGIWLFQGAITAPGKMSVMSNSSMENITINFTMECGSYEQLGYWPNNFDDFASSLV
LLYNIMVVNNWQVFMDAYTRYTTEWSKVYFVSWWLTSSVMWVNLFVALILENFIYKWDRS
VTCSVADVERTGYETTVQLMFREQIQEPTEEELVTQLHQHPHLHLS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggaaccactgctgactggaagcattaactacggctcccaccctgacaacaat
gatcaccttgaaaagggatccccaaagacaagacgtctgtcctactcggttgctgcagag
tattgctgtgtcggagggggtgatgtggatctctacctccagcaagctgttgtgtttatt
gaggacgccatacagtaccgatccatcaatcatagagtggatacaaactcgttacgtctg
tacaggtggtactactccaggttatggcaatgggggctgggcctgactattgcggtcgtc
ttgatgctggctttcatcgagaggccctcgtctttctcctacacatcagacccccgcttc
agacctcccccctgggagcccccctgtggcctgacagagggcatagagattgtctgcctc
atcatctttgccattgacctcactaccaagagctatttgattggctgggacgagttccgg
aaatgcaagtggttgattgtctacatcttggccgtctcagcatctgtaattgattggacg
ttgacgttgagcatgtattgtgatcagaacctacgagttaggagactcattcggcccttc
ttcctccttcaaaactcctccctgatgaagaaaacgttaaagtgcatcaagaggactctc
ccagagatagccagtgttatcctgctcctggccctccacctctgcctcttcaccatgatt
ggcatgctgctctttgctaaaggagagaacccaaagcacaacggggagtgggagacctac
ttcagagacttgcccacgtctctctcctctctcttggtgctcctcactacagccaataac
cctgatgtgatgattccggcctattccttaaaccgaggatactccatcttctttattctc
tttagtggttttggaacctacttcttgatgaacttactaactgccatcatttacaaccag
ttcaggggatacctgctgatgtctgtccaggcgtccatcctaaggaggagactgggcgtc
agagctgcctttgaggtcatgtcctgccaggggcggggtcaggacgctacacactcagag
gagcatgtagagcgtgtgcgggtggatgcctctttgcaggtcatggcgagggtacaaatg
aagtcctactacagacaagccatcatcaagagattgcagcagttgtcagatggcttcatc
cagtgggaggccttccggggtctttttgatgagctggacaaggaccgcatcaaagagcac
cctccgaagccagagtacaactctccgctcctccagaagcttcagttggttttcagccac
tactatgtaatgatagtgggcaacgccgtggccctggccaatgtcatgtgcatctgtacc
atactggtgcttgactccgagaagtccatggcagagcgggatgactactacatggaagtt
attaactgcttctttattctatactacctgatggagatgagtctaaagatattagccttt
gggtggagaggctacctgtcatacagaaacaacatctttgatggtcttctcacattttgc
cttctggtccttcagatcaccatttttgccacctacaggcttccatttcctaaatggaac
ccagcgtcgcgtggtctgatgtctctgtgggagatggtgcgtctggtcaacatgctcatc
gtcgtccgcttccttcgaatcatccctgatatcaagctgatggcccttgtagcgagtact
ttggttgacctggtgaaaaacctccgagcttttgcaggaatactagtggtggtgttctat
gtgtttgctgtccttggcatctggctgttccagggagccatcacagctccagggaagatg
agtgtgatgtccaattccagtatggagaacatcaccattaacttcaccatggagtgtggt
tcctacgagcagctgggctactggccaaacaactttgacgactttgcttcttccctcgtc
ctcctttacaacatcatggtggtgaataactggcaggtgtttatggatgcctacaccaga
tacaccacagagtggtccaaggtctactttgtctcctggtggcttacctcctctgtcatg
tgggtcaacttgtttgtggctctcatcttggagaacttcatctataagtgggaccgaagt
gtcacatgttcagtggcggacgttgagcgaacaggctatgagaccactgtccagctcatg
ttcagagaacaaattcaggagcctacagaggaggagctggtcacccaactccaccagcac
cctcacctgcatctcagctga
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