Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384467
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Entry
139384467 CDS
T10872
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139384467
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139384467
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
139384467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
139384467
NCBI-ProteinID:
XP_070985344
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Position
26:complement(42885433..42965378)
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AA seq
603 aa
AA seq
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MSGHLLRRNSSKEGLQNLLRVTAQRSIEDAEEIERERRRRARERQGDQDPHTHTGPASTT
SPTPDNGLPELYPMCESELKASGCQLALEEDEGFSDWTQRLEKRRQRHLEEQESSEDHQP
QQQQNQSQQHEPQQHHPQQQHQPQQHHPQQQQNQPQQHQPQQHHPQQQQQPQLLRLNRAS
PIRPCLKTCPGPGPEEREEKEVEWERRASNKTQDTSRRATDDKVAEKKKSELKISYTSKV
MRHVNSNGEAAGAEVTSYLVAGKLSPSRSGSLGGQRQEEVDGEVPGGQLETEKTPGQGQG
TLEQLRQRQQEDQEEMEELNRRREEKRRAREEEEHQREKEEQHRQEQEEEERKRVKDGIE
SRRMAASERRMKNLSISSIEGDESFSPFSPMSPTFKNDTEERMTSENTCTINERTESLNR
SLQKSNSIKKTQPPIPISKIDNRLEQYTHAIETSSMEAKAARQQALTDLPSPTEPVASKK
NLFEAGEAWSQPPRETPSKDTEGLNVGVADLIHQWVKGNPDGSCKSLSKPAEVKAGDVLS
KKNLWENLGDSSPSGRAGKGASSGKKYKFVMMAHGKYEKVVVGDDDYNEHTNGKSTGQCL
EEL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcatttactaaggagaaactccagcaaggaaggtctgcagaacctgctcagg
gtgacggcccagcgcagtattgaggatgctgaggagatagagcgggaacggagacgaagg
gccagggagagacagggagaccaggacccacacacccacactggcccagccagcaccacc
agccccacaccggacaatgggctcccggagctatatccaatgtgtgagagtgagctgaag
gctagtggctgccagttggctctggaggaggacgagggcttcagtgactggacccagagg
ttggagaaacgcagacagcgccacctggaggaacaggagtcctcggaggaccatcagccc
cagcagcagcagaatcagtcccagcagcatgaaccccagcagcatcacccccagcagcag
catcaaccccagcagcatcacccccagcagcagcagaatcagccccagcagcatcaaccc
cagcagcatcacccccagcagcagcagcagccccagctgctcaggctaaacagagcctcc
ccaatcagaccctgcttgaagacatgtcctggacctgggcccgaggagagggaggagaag
gaggtagagtgggaacgaagagccagcaacaagacacaagacacttcaagaagagcaaca
gatgacaaggtcgcggagaagaagaaatctgagctgaagatctcctacacctctaaagtc
atgagacacgtcaacagcaacggggaagcagctggggcggaagtgacctcatacctagtt
gcagggaaactgtctccaagtcgtagtggcagcttgggagggcagagacaggaggaggtg
gatggagaggttcccggggggcagctggagacagagaagacaccaggccagggacagggc
accctggaacagctgagacagagacagcaggaggaccaggaggagatggaggagttgaac
cgcaggagagaggagaaacgcagagccagggaggaggaggagcaccagagagagaaagag
gagcagcacagacaggaacaggaggaggaggagaggaagagggtgaaagacgggatagag
agtaggaggatggcggcttcagagagaaggatgaagaacctcagtatttccagcattgag
ggagacgagtccttcagccccttcagtcccatgagccccaccttcaagaatgacaccgag
gagaggatgacgtctgagaatacctgcacgatcaacgagaggactgagtctctgaaccgc
tctctgcagaaaagtaacagcatcaagaagacccagcctcccatccccatctccaagatc
gacaacaggctggaacagtacactcatgccatagagacgtcctctatggaagccaaggca
gccagacagcaggctctgacggacctgcccagccccactgaacctgtggcctccaagaag
aatctgtttgaggccggggaagcttggagccagccgcccagggaaacaccttccaaggat
acagagggtctgaatgtaggcgtggccgacctcatccaccaatgggtgaaagggaaccca
gacggaagctgcaaaagcctctccaagccagcagaggtgaaggccggtgatgttctgagc
aagaagaacctctgggagaatctgggagactcttccccgtctgggagagctgggaaggga
gcttcctctggtaaaaagtacaaatttgtgatgatggctcacggcaagtatgagaaggtt
gtcgtcggtgatgatgattacaatgagcacacaaacgggaaatcaactggacaatgcctt
gaggaactgtga
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