Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384471
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Entry
139384471 CDS
T10872
Name
(RefSeq) photoreceptor-specific nuclear receptor-like
KO
K08546
nuclear receptor subfamily 2 group E member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139384471
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139384471
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
139384471
Nuclear receptors [BR:
ocla03310
]
2. Hepatocyte nuclear factor 4 like
2E. Tailless like receptor
139384471
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
139384471
NCBI-ProteinID:
XP_070985355
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Position
26:42535589..42547018
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AA seq
434 aa
AA seq
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MEEHLSNIHPSSSPSDSSGSSGTDCDSRGAKSPAPGKALSPAPGKALSPALLCKVCGDTS
SGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMN
KDAVQNERQPRSTSQVRLDSIDVDTDKEHLSTTRDPTSSSSSCSVITRPHITSTSISSSS
APPQRCAPPSPQNNHRFMVSLMTAETCAKLEPEDVDENIDVTSNEPERESSDYHMSLYPS
STENVYETSARLLFMSVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLCAIQWSLPLDSC
PLLSLPDLSPPTMQSKTSYTSVDLRLLQEVFSRFKALVVDPTEFACLKAIVLFKPETRGL
KDPEQVENLQDQSQVMLGQHIRSHYSSQPARFGKLLLLLPSLRFVSSERIELLFFHRTIG
NTPMEKLLCDMFKN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacacctgtctaacatccatccttcctcgtctccgagtgactcttcagggagc
agtggcaccgactgtgacagcagaggagcaaagagtccagccccgggtaaagccctgagt
ccagccccgggtaaagccctgagtccagccctgctctgtaaggtctgtggggacaccagc
agtggaaaacactacggcatctacgcctgcaacggctgcagtggattcttcaaacgcagc
gtccgacggagactcatatacaggtgtcaggctggtacgggcatgtgcccagtggataag
gcccatcgtaaccagtgccaagcctgtcggctgaagaagtgcctccaggcgggcatgaac
aaagatgctgtccagaacgagcgtcagccccgcagcacgtctcaggtgcgtctggactcc
atcgacgtggacacagacaaggagcatctgtccaccacacgggatcccacttcctcttct
tcttcctgttcagtgatcacccgacctcacatcacctccacctcaatcagctcgtcgtct
gccccaccgcagcgctgtgcaccccccagcccacagaacaaccaccgcttcatggtcagc
ctcatgaccgctgagacctgcgctaaactggagcctgaggatgttgatgagaacatagat
gtgaccagtaacgagccagagagggagtcctcagactaccacatgtccctgtacccttcc
agtacagagaatgtgtacgagacgtcagcccggctcctcttcatgtctgttaaatgggcc
aagaacctgccagtgttctccaatctcccattcagagaccaggtaatcctgctggaggag
gcatggtctgaactcttcttgctgtgtgccatccagtggtctctccccctggacagctgt
cctctgctgtccctccccgacctgtcccccccaaccatgcagagtaagacatcctacacc
agcgtggacctgcgtctgctccaggaggtcttcagtaggttcaaagccctggtcgtagac
cccactgagtttgcctgcctcaaggccatcgtcctcttcaaaccagaaacccgaggtctg
aaggacccggagcaggtcgagaacctacaggatcagtcccaggtgatgttgggacaacac
atcagatcacattactccagtcagcctgccagatttgggaagctcctcctgctgttgccc
tctctgcgtttcgtcagctctgagcggatcgagctcctcttcttccacaggaccatcggc
aacacccccatggagaaacttctgtgtgacatgttcaagaactaa
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