Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384480
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Entry
139384480 CDS
T10872
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139384480
03037 Cilium and associated proteins [BR:
ocla03037
]
139384480
Transporters [BR:
ocla02000
]
Other transporters
Pores ion channels [TC:
1
]
139384480
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139384480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF6221
Motif
Other DBs
NCBI-GeneID:
139384480
NCBI-ProteinID:
XP_070985366
LinkDB
All DBs
Position
26:33778704..33830704
Genome browser
AA seq
1188 aa
AA seq
DB search
MSGVSETAVVSRPSTTVKRHKSVRKNSRRIYSSYQDNQPGQSDEEGKEDEHADSNDPEQM
FQNIQFQKEIIANIRTRAWPMRRKLKALKQAREIVLKYEGRLTRTRGYQAAGADLLKKVS
RLLYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTVMTGAFIVIPELLA
GEPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGPVRKLGSAGYRLPLAY
FLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKGA
AIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLELE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYSL
IIALLDKVNSMSMAAASMVSGNLSDSTAFMATISQPGETSLSTLVSDISISENHNSTIAT
IAMVLDVNTSISTSKVTMATMYNHTGMFEQNKQKKPDECWETYVGQEMLKLSIIDMIFTV
ASILLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGSFFSPC
LPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIV
RYRPSQHCGPFSGQEKIYDIISETIANDFPLWFSKVMSYVTSPVVALPALLLLFMLIYYL
QAIARSLKFTNNQLRMQLQTERTEDKKKVLQLASARLQAPEVPGGDRKPDQQDGEFTSRE
SSIRTPSPRPNGSVTNFQSPDRRGNGIRTITQSASRVETARATFAAGAPRSPTVSILHKQ
RPEIIPNRHPSYLGGPSGTCRSKSYHHVAYNPPTRYSSENIHSDPLYRKTIRPMHSAEAA
GIVTAQSYVGRRPYTTRYVIVNEHEARKKLLRSATRVPRHFRAEDPGGEIVELIPRNTKR
YTPRAPHLHGHPHRSNLPQSHLSDEEEEEETGGKRESRRGSFGQNHRPRSLSDLQQPARF
YIGERLETKLSMASKDSHTARGRYGGEAQKGDWEDMETRLHSLSQTSIRGAELPPPVRHT
QSPARHPHSPSRLVHSPPQGPGRRLEPQVKPKTSRSKLEPSLTESDSASLASSSDQQNSS
TDQYIQVIHNKEKYLKSEARQGKLAKKKSKASIDLNVSGSKDLVCSNV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgtgtctgagactgctgtggtcagtagaccctcgactaccgtgaagcgacac
aagagtgtcaggaagaactccaggcggatttactcatcttatcaagacaaccagccaggc
caatcagatgaggagggcaaggaggatgaacatgcggacagcaacgacccagagcagatg
ttccagaacatccagtttcagaaggagatcatcgccaacatacgcacccgagcctggcct
atgagacgcaagctcaaagccctcaagcaggccagagagattgtcctgaagtacgagggg
aggctaacaaggaccagagggtaccaggctgctggggctgatctgctgaagaaggtctcc
aggttgctgtacaacatcgtggttctgtttattccctgggagatgaggatcaagaaaata
gaaagtcactttgggtcaggggtggcctcctacttcatcttcctcagatggctgtttggt
atcaacatagtccttactgtcatgactggagcattcatagtcatacctgagctcctggcc
ggagagccgttcggaacaacccggagtaagaccattcccaaggagcacctggcctcagcc
caagatctggacaccatctggtctcttgggggctacctccagtactcggtgttgttctat
gggtactatggcccggtgaggaagctcggcagtgccggctatcgcctccccctggcctat
tttctggttgggatggctgtttttgcctacagtttcatcattctgttaagaaagatggct
aagaactcccgtctgagcctagccagcgcctctgatgagaacttcaccttctgctggaga
gtgttctgtgcctgggactacctcatagggaaccctgaggctgcagagagcaagggagcc
gctatcgtcaacaacatcagggaggccattgttgaggagcaggagaaaaagaaggacact
agtctagcagtcctgatcagtctgcgtatcctagccaacatcctggtccttctctctctg
gctggcagcatttatataatctactttgtggtggaccgctcccagaaactagagctggag
aagccagagctaacactatgggagaagaatgaggtgagtgtggtggtgtccctcatcacc
atgattgccccgtctgcctttgagctggtggctcaactggagatgtaccatcccaggacc
tccctccgcttccagctggccagagtcctggtgttgtatctgggtaacctgtacagcctc
atcattgcccttctggacaaggtcaacagtatgagtatggcggcggcctctatggtttcg
gggaacttgtctgactccacggcattcatggcgaccatctcccagccgggggagacgagc
ctctccaccctcgtatccgacatctccatctctgaaaaccacaacagcaccattgcgacc
attgccatggtgctggatgtcaacaccagcatcagcaccagcaaggtcaccatggcaacc
atgtacaaccacactgggatgtttgagcagaacaagcagaagaaaccagacgagtgctgg
gagacctacgttggacaggagatgttgaagctgtctatcatcgatatgatcttcacggtg
gccagtatcctgttgatagacttcatcagagggctggtggtcaggtacctgagtgactgc
tgctgctgggacctggagagcaagtttcctgagtatggggaattcaagatagctgagaat
gtactccacctgatatataaccaaggaatgatctggatgggttcgttcttctctccctgt
ctgcctgcctttaacgtgttgaagctgataggcttgatgtacctgaggagttgggctgtg
ctcacctgtaacgtccctcaccaacaggtgtttagagcatccagatcaaataatttctac
ctggctatgctgttgttcatgctttttctgtgtatgctgcccaccatcttcgccatagtg
agatacagaccttcccaacactgcgggccatttagcggtcaggagaagatttatgacatc
atctcagagacgatagccaatgacttcccgctgtggttcagtaaagtgatgagttacgtc
accagccctgtcgtagcgttgcccgctctgctgctgctgttcatgttgatctactacctt
caggccattgccagatcccttaaattcaccaacaaccagctgaggatgcagcttcagact
gagagaacagaagacaagaagaaggtattacagctggcttcagcgaggctacaggcccca
gaggtccccgggggggacaggaagcctgaccagcaggatggtgaattcaccagccgcgag
tcatccattcgtacgccgtcgccacgacccaacggcagtgtcacaaacttccagtcgccc
gatcgtcgtggcaacggcatccgcaccatcacccagtcggcatcgagagtcgagaccgct
agggcgacatttgctgctggggcgcctagaagtccaacagtgtccatacttcacaagcaa
aggccggagataatccctaacagacacccttcctacctggggggccctagcggtacctgc
aggtccaagtcctaccatcatgtggcgtacaaccctccgacacgctactcctcagagaac
atccactccgacccactctacaggaagaccatcaggcccatgcactccgcagaggcagct
gggatagtgaccgcccagagctacgtgggccgtcgcccctacaccacgcgctacgtcatc
gtcaacgagcacgaagctaggaaaaagttgcttcgatcagccacacgcgtccctcgccac
ttccgagcggaggacccggggggtgaaatcgtagagctgatcccgcggaataccaagcgg
tatactccaagggctccgcatctgcatgggcacccacacaggtcgaatctgccacagtca
cacctgagtgatgaagaggaggaggaagagacaggggggaagagggagtctaggaggggg
tcgttcgggcagaatcaccggccccgctcactctccgacctccaacagccagctcgcttc
tacatcggagagcgcctggagaccaagctgtctatggcgtcaaaagacagccacactgct
agggggcgctacggcggtgaagcccaaaaaggggactgggaggatatggagacgcgcttg
cactccctctcccagaccagcatcagaggagcggagcttccaccaccagtcaggcacaca
cagtccccagccagacacccccactcccccagcagacttgtacactcacccccccagggc
cctggaagacgcctggagccccaggtcaagcccaagacatccaggtccaagctggagcct
tccctgactgagtcggactcggcctctctggcctccagtagcgaccagcagaacagcagc
acagaccagtacatccaggtcattcacaacaaggagaagtatctcaagtctgaggcaagg
caaggcaaactggctaagaagaagtccaaagccagtatagatctcaacgtgtctgggtcc
aaagacctggtctgctccaacgtgtag
DBGET
integrated database retrieval system
