Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384509
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Entry
139384509 CDS
T10872
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other basic domains
RF-X
139384509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139384509
NCBI-ProteinID:
XP_070985431
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All DBs
Position
26:18765873..18800268
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AA seq
1459 aa
AA seq
DB search
MTEDQQQHDQHPKLGSGISTLPSLVPGLQGTEASALQLKIKNSICKSVQSKVDNILQDVE
TFTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRSH
LEEHPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLS
RQFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGVKTPLPSSAFAPTAEAHSFQSQVK
TLPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQSRRADGGTPGVGSITCRSPALLSPH
PTIGIMVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNIP
ASPVGDRSARHRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHISSVNVVKMT
TISLAPNCSTTTTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGRAT
TTPTIDIKMIEGEAISEGSPALGASRLTMAQEAAGGQRAGGAVPRAASVPMPHTKGSLGL
EAMAGTNCNGKSSLRNNTVAATAGSNNNTNNESTLYLTVSNQNTSTTLSPNGGTVATSLI
ASKSPRKRPGVGPESYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRKGTPVRPVSAP
AIGKVTVKLNSTVPTRILSLSDSPIGTRGFQTVVKPQSSVQRRDTPITMDTSSISNVSAP
AGHAQIQHQQHMTGNMQAMPNSSALLEQSAVSDLRNTMWVGGQLEGGKQQQQQAYAQQIT
DHKQASTPVMEPLAMMGQAPASSQLSMQTDMDYFHFNDDDMTQDSIVEELVQMEEQMKLN
SSLQAFGANVTLQGQQSVMQGNMMSSNQTMTPYYQSVHSSTTPVQTPTPTPTSTSEMMGG
GQGLTRESPCSRMAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINS
SITGYHDGSIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNKSGGNSINGISILPSYQDLV
DDHFRKPHAFAIPGQSYQSQTRHHDGHYGRLTPISPVQQQAASMANLNKQESFAVPAPLD
NKTTSTSSASGTFRCRSVSPAVRQRNLSGNQSGNIPRTAVSPFTSPVTPEMINIFANSHG
DVSSMAQRSQSVPVNVMMQTEALPMQGQTNSKKITNVLLSKMDGDSDDAVRGLGINNLPS
NYTARMNLTHILETTPSFPRSANHQTLTSNTQNAYEFQKPGYLMKNSRNEQMILSAGDSQ
AQSATGEQQHQQSQPMLLAQNLQQQQQQLQLDFSTTVKDLLVDSSLTPGNQLVGQVSELN
PVGSDFRLTSDLSSSINDLNNLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSETAN
SNGFDWLESKDQPTVGLMG
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagcacccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccagtgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagtcaaaggtggacaatattttgcaagatgtggag
acgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaaggactgagagagggtctgccagtcctggagaactgtcatgcagtgatcag
agctccatgtcatcaagccgcactcaacagatgcacgcgttcaactggattcgcagtcac
ctagaggaacacccagaaacctctctgcccaaacaggaggtctatgatgagtacaagagc
tattgtgacaatctctgctaccacccactgagtgcggcggactttggaaagatcatgaaa
aatgtatttccaaacatgaaggcacgtcgacttggcatgagaggcaaatcaaaatactgc
tatagtggactgaggaagaaagcctttgtccacatgccatctttacccaacctggagtta
cataaaacaggggacgggtgtgaggtgctggaggcctcaggtcagctgtgcagtgcggag
gaggaggtgcgctctgcggcctgtggcctggtgtgtgagtgggcccagaaggtgctgagc
cgccagtttgatgctgtggaggacctggctcgcttcctcctcaacagccactatatcggc
accaaatctgtggcagccctcactgtcatgactggtacaccaacaggagttaaaacgcca
ctgccatcctcagcattcgcaccaacagctgaagcccactccttccagtcccaagtgaag
accctgccctctccctccatcgatgccaagcagcagctccagcggaagatccagaagaag
cagcaggagcagatgctgcactcccccctccccggagaggctcagtctaggcgggctgac
gggggcacgcctggggtcggctccattacctgtagaagcccagccctgctctccccacat
cccaccattggcattatggtagctgcagtccccagccccatcacggtacaaaggagcagg
cagctgatgtcccccagtcctgtgggaacatcggagggcaagattctgcctgtcaacttc
caagtggtgacccagtcaatgcagcctgtcaagtgtcccaagacccctcagaatatccca
gccagccctgtgggggaccgctctgcccgccaccgctatgcccagatcctgcctaaaccc
tcagccaccagcgccatcaccctgcgctcgccccccaccctgctcatcaccaacagcccc
atcaagaccgtgatgcagcccacaccccacatcagctctgtcaacgtggtcaagatgacc
accatatccctggctcccaactgtagcactacaacaaccttaacaaacaccaccttaagg
cctgcctctgctggcatgggcagcactgtagccctggaggagagcagacccagcccgcgg
gccaggagtggctctgcagcccccatcctgtcccccttagccaggtcaggccgggccacc
accacccctaccatcgacatcaagatgattgagggtgaagccataagtgaaggcagtccg
gccctgggtgctagcaggcttactatggctcaggaagctgcagggggccagagggctgga
ggagctgtaccaagggctgccagtgtgcccatgcctcacactaaaggctccctgggactg
gaggcaatggctggaaccaattgcaatggcaagtcctctttgcgcaacaacactgtggca
gctacagctggtagcaataataacaccaataacgaaagtactttgtatttgacggtctcc
aatcagaataccagcaccactctgtcacccaatggcggcactgttgccacatcactcatc
gcctccaagagccccaggaaacgcccaggcgtcggcccagagtcttatcccacgcctgtc
aaaagggtcttcatctcccagcaacctcttgggggctccgatggttacagacatgggatt
ggtgcaggagtgaagaaactccccagaaaaggaaccccggtcagacctgtaagtgcacca
gccattggtaaagttactgtgaaactgaactccactgtcccaactcgaatcctgtcactc
tctgattcccccatcggaaccagaggcttccagactgttgtcaagccacagagctccgtg
cagagaagagacactccgatcaccatggacactagcagcatcagcaacgttagtgccccg
gctggtcatgcacaaattcagcaccagcagcacatgaccggtaacatgcaagccatgccc
aacagctctgccctactggagcagtctgctgtgagtgacctgaggaacaccatgtgggtt
gggggccagctggagggaggtaagcaacagcagcagcaagcctacgcccagcagatcaca
gaccacaagcaggcatccacaccggtcatggagcccctggccatgatgggccaggcccca
gcctctagccagctctccatgcaaacagacatggactacttccatttcaatgatgacgat
atgacccaggacagcattgtggaggagctggtgcagatggaggagcagatgaagctcaac
agcagtctgcaggccttcggagctaacgtgacgctgcaaggccaacagtctgtaatgcag
ggcaacatgatgtcctccaaccagacaatgaccccttactaccaatcagtacacagcagc
accacccctgtccaaacccctaccccaactcccacatccacctctgagatgatgggagga
ggccagggcctgactagggagagcccctgctcccgcatggcccccaccaccccggtggac
agtgccctggggagcagccgacacacccccatcggcactccacactccaactgcagcggc
agcgtgccccccagccctgtggagtgcaggaacccctttgccttcactcccattaactcc
agcattacaggctaccacgacggcagcattgtctccagcagccccgtcaagcccatgcag
aggcccatggctactcacccagacaaggccaaactggagtggatgaacaatggttacaac
aaaagcggggggaactccatcaacggcatcagtatcctccccagctatcaggacctggtc
gacgaccacttccgaaagccccatgccttcgccatccctggccagtcctatcagtctcag
acgaggcaccacgacggacactacggccgcctgacacccatctctccggtgcagcagcag
gcagccagtatggccaacctgaacaagcaggagagctttgctgtgcccgcccctctggac
aacaagaccaccagtacatcttcagcaagcgggaccttccgctgtcgtagtgtgagccct
gccgtgcgccagcgaaacctgagtggcaaccagagtggcaacatcccccgaacagcggtg
tcccccttcacctcccccgtgacccccgagatgatcaacatcttcgccaacagccatggg
gacgtcagcagcatggcacagaggagccagtctgtgcctgttaacgtgatgatgcagacg
gaggctctgcccatgcagggccagaccaacagcaaaaagatcaccaacgtgctcctgagc
aagatggacggggacagtgacgacgcggtgcggggcctgggtatcaacaaccttccgtcc
aactacacagcccgcatgaacctcacccacatcttagagaccactcccagcttccccaga
agtgccaaccatcagactctgacttccaacactcagaatgcgtacgagtttcagaagcct
ggttacctcatgaagaactctaggaacgaacagatgattctctcagcaggtgacagccaa
gcacaatcggctactggagaacagcagcatcagcagagccagcctatgctgctggcccag
aaccttcagcagcaacaacaacagctgcagctagatttcagcaccaccgttaaagacctc
ttagtggacagcagccttactcctggcaatcagctcgtgggacaggtgtcagaactcaac
cctgtggggtctgattttcgactgacctctgatctttccagtagcatcaatgacctgaac
aatttggacacaaaccttctgtttgaccccaatcagcagcagggacaatatgaagactct
acactggaggaactgaagaatgatccgctgttccagcagatttgcagcgagactgcgaat
tccaatggatttgattggctggaaagtaaagaccagcccacagtcgggttaatgggttaa
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