Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384807
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Entry
139384807 CDS
T10872
Name
(RefSeq) homer protein homolog 2-like isoform X1
KO
K15010
homer
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
139384807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139384807
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139384807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WH1
NOCA1_mid
DMPK_coil
CEP89
CENP-F_leu_zip
CCDC39
EVH1_PP4R3
CEP83_CC_1st
ODF2_C
Rab11-FIP3
CCDC192
Phage_scaffold
LEKR1
LIP-1
FKBP15
GAS
MAD
CCPG1_N
CCDC171
CATRA-C
TSC22
ATG16
CCDC-167
Rod_CreS
SfNPV_sf27
DUF1786
HmpF
DUF3450
TPR_MLP1_2
VID27_PH
FUSC
EzrA
Nuf2_DHR10-like
CCDC89
PMD1-like
VGPC1_C
CCDC113_CCDC96_CC
T4SS_LegC2C7
Ddi2_HDD
Lebercilin
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
139384807
NCBI-ProteinID:
XP_070985794
LinkDB
All DBs
Position
26:complement(41285588..41403091)
Genome browser
AA seq
356 aa
AA seq
DB search
MGEQPIFTTRAHVFQIDPTTKKNWVPASKQAVTVSYFYDSTRNSYRIISVDGSKVGVIIN
STITPNMTFTKTSQKFGQWADSRANTVFGLGFASEQQLAKFAEKFQEVKEAAKLARDKSQ
EKMETSSNNSQESGRETPSSTQASSINGTDDEKISHGGPETAALMSENDKLKTTVEQSNT
NAKKLETELQTLRDSNARLVDALTESSANVEIWKKQLNTCKEESDTLREKIAELESQCEK
ANVEKERNSKLTVRVQELETELQDKEQELENLRKQAEIIPQLMAECESITEKLQAAEVKN
KDLEDRMEGLQADIEDSQSKQGNMKGELKKFMDVLDGKIDELHEFRQGLSKLGVDN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggggagcagccaatcttcaccaccagggcccatgtgttccagattgacccgaccacc
aagaagaactgggtcccagccagcaaacaggcagtcaccgtttcctacttctacgactcc
acacgcaacagctaccgcatcatcagtgtagatggatccaaggtaggggtgatcatcaac
agcaccatcaccccaaacatgaccttcaccaagacctcccagaagtttggccaatgggct
gacagcagagccaacacagtgttcggactggggtttgcctccgagcagcagctggccaag
tttgctgagaagttccaggaagtgaaggaagcagcgaagctggccagggacaagtcacag
gagaagatggagacatcgagtaacaattcccaggagtcgggtcgtgagactccctcgtcc
acccaggcctccagcatcaacgggacggatgatgagaagatctcccacggaggaccggag
accgcagcgctgatgagcgagaatgacaaactcaagaccactgtggaacagagtaacacc
aatgctaagaagttggagacagaactccagactctacgggacagtaatgctcggctggta
gacgcgctaacggagtcctccgctaacgtagagatctggaagaaacaactcaacacctgc
aaggaggagagcgacacgctgagggaaaagatagcagagttggagtctcagtgtgaaaag
gccaacgtggagaaggagaggaactctaagctgactgtacgagttcaggagctggagacg
gagctgcaggacaaggaacaggaactggagaacctgaggaagcaagcagagatcatccct
caactcatggcagagtgtgagagcatcacagagaaactacaggctgctgaggtgaagaac
aaggacctggaggataggatggagggtcttcaggccgacatcgaggacagccagtccaag
cagggcaacatgaagggagagctgaagaagttcatggacgtcctggatgggaagattgat
gagctgcacgagttcaggcagggcctgtccaagctaggggtggataactga
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