Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384820
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Entry
139384820 CDS
T10872
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139384820
04136 Autophagy - other
139384820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139384820
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139384820
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
ULK complex
139384820
Atg1 complex
139384820
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
139384820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
139384820
NCBI-ProteinID:
XP_070985814
LinkDB
All DBs
Position
26:7926657..7939129
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AA seq
512 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIERSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNVGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQMGVPG
KEGGVPQQVPVQPCHGAQAEHRRVPSCPPADHVPATPSSSGEDAETSSRIVGVKSGSPCG
VLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPESSATSSPLQ
GSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLTIDVSS
QSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtacaggtgatagtccaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaatcaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcgaacggtcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaagtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcacgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacgtgggacacatgcatccatgtaactacagagcacccggagaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagctgct
gacttctgccacccctccaccttaaacgctgccaacccacaccagatgggagttccaggg
aaggagggcggcgtaccccagcaggtgcctgtgcagccttgtcatggagcccaggcagag
catcgacgagtgccctcatgcccccctgctgatcatgttcccgccacgccctccagcagt
ggtgaggacgcagagacctcgtcgaggatcgttggggtgaagagtggctctccctgtggt
gtattggagaccaccttcaccaggaaagtgggtgcctttgtcaacaaaccaggcacacag
gtaaccacggcaagcctggacttaccatttgcagcatttgctcccagagcatatgacctc
gaggaaaatgaccctatggttcagcctccggagtcctcagccacgtcctctcccctgcag
ggcagtttgcactcccaaggctctggtgagagtggaggcccggcacaggacgactttgtt
atggtggactttaagcctgcgttctccaaggatgacctccttcccatggaccttggcaca
ttctacagagagttccagaaccccccacagctcaccagcctcactattgatgtcagttct
cagtccatggcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaac
attgatgaatttgatgcatttgtggacacattgcagtag
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