Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384838
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Entry
139384838 CDS
T10872
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139384838
mRNA cycle factors
P-body specific factors
139384838
Membrane trafficking [BR:
ocla04131
]
Others
Actin-binding proteins
Myosins
139384838
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139384838
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139384838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139384838
NCBI-ProteinID:
XP_070985835
LinkDB
All DBs
Position
26:30605633..30684029
Genome browser
AA seq
1850 aa
AA seq
DB search
MNENQELDYMFVKFARVWIPDADEVWKSAELTKNYKHGDSTLHLTLEDGMDIEHKLDDKT
KNLPHLRNPDILVGENDLTALSYLHEPAVLHNLKVRFTDSKLIYTYCGIVLVAINPYENL
PIYGSDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA
MRYFATVSGAATEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIG
ANMRTYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKNLKLGSADVFHCTNQGRNPVI
DGVDDAKEMCTTQHAFSLLGINELNQKGLFQVLAAILHLGNVEIKDRDSDSSIIPPNNRH
LTVFCELMGVTYQDMSHWLCHKKLKTAQETYIKPIPRLQASNARDALAKHIYAKVFNWIV
DHVNKSLRATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEE
YLKEQIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDSWAQKLYNTHLKTCS
LFEKPRMSNKAFIIQHFADKVQYQCDGFLEKNKDTVNEEQINVLKASKLDLLVELFQDEE
KVTSPTGTAPGGRTRLSVKPKEVRSGASSKEHKKTVGCQFRNSLAMLMETLNATTPHYVR
CIKPNDLKFPFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMRQKDV
LSDRRLTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRKACVRIQKTIRC
WLVRKKYLRKKHAAITIQRYTRGHQARCLVKYMRQTLAAITIQKFQRMCVQRKVYLQKQA
AALVMQTILRAYMARQKYQGLLRNHKAVFIQKHVRGWLARQRYKRSLRAIVYLQCCIRRM
KAKKELKKLKIEARSVEHFKKLNVGMENKIMQLQRKLDEQAKDNRVTSERLNCLETSHAV
ESEKLKVEVSKLKGIEEEAKNNANRVTSLLEQLERLRRELTTTQKEKKTIEDWATKYRDE
MEKMVAELKQQNGLLKTEKDDLNRMIKEQSQQMTEKMTRALAEETQQLESDLNEERSRYQ
NLLTEHLRLEERYDDLKEEITLSVSVPKPGHRRTDSTHSSNGSECTYNSEFAESEESSRH
GEDVTRGMDTSLTLKLQKRVTELEQEKSSLRNELENKEEQFQRARVRDDEEHKKSRGAEL
EYESLKRQELDSENKKLKHDLTAMRQSLLGNAGAGAGAPGSPPYKVLMDQLNSSCEELEV
RKEEVLILRSQLVSQKEAMQHKDEKETMTEPVHYAEDVHKMKDSGAITQAYLGLKETNRL
LEGQMQQQRRSYDNEVEVLRGELQSVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRL
TNENLEMLRTEDPTAYRSAKVNILRRMVDLMEQLEKQDKTIRKLKKQLKVFSKKIGEMGA
GHVETISPGQMVEETVRPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLI
PGLPAYILFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFL
HCLKQYSGDESFMKHNTPKQNDHCLSNFDLAEYRQVLSDLAIQIYQQLIKCMENILQPMI
VSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLESILRQLSAFHSTMCQHGTDPELI
KQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKSLMLCGAKETLE
PLIQAAQLLQVKKKTDEDAEAICSMCNSLSTSQIVKVLNLYTPVNEFEERVSVTFIRTIQ
TRLRDRCETPQLLMDTKIIYPVTFPFNPSSLALETIQIPGSLNLAFLTRV
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaatcaggagttggattatatgtttgtcaaatttgctcgggtgtggatccct
gatgcagatgaggtgtggaagtcagcagagctcactaagaactacaaacatggagattcc
accctacacctcacactggaggatggaatggacattgagcacaagctggatgataagaca
aagaaccttcctcacctccggaaccctgacatcctggtgggggagaatgacctcacagct
cttagctacctccacgagccggccgtcctgcacaaccttaaagtccgcttcaccgactcc
aaactcatctacacatactgtggtattgtgctggtggccattaatccctatgagaacctt
cccatctacggtagtgacatcatcaatgcgtacagtggccagaacatgggagatatggac
cctcacatcttcgctgtggctgaggaggcttacaaacagatggccagagatgagaggaac
cagtctataatcgtaagcggtgagtcgggagcagggaagactgtctcagctaaatacgcc
atgcgctactttgctacggtcagtggagcagccacagaggccaacgtagaggagaaggtc
ctcgcatccaaccccatcatggaggcgataggaaacgctaagacgactcgtaacgacaac
agcagtcgttttgggaagtacattgagatcggcttcgacaaacgctaccgtatcattgga
gctaacatgaggacatatctactggagaagtctagagtggtgtttcaggcggacgaggag
aggaactatcatatcttctaccagctgtgtgcgtcctcccatctaccagagttcaagaat
ctgaagctaggtagtgctgatgtcttccactgcaccaatcagggccggaacccggtcatc
gatggagtcgacgatgctaaagagatgtgcacaacacaacatgccttctcactgctaggc
atcaacgagttgaaccagaaggggctgttccaggtcctggctgccatcttacatctgggc
aacgtggagatcaaggaccgagactctgacagcagcatcatacctcccaataaccgccac
ctgacggtgttctgtgagctgatgggcgtgacctaccaggacatgtctcattggctgtgc
cacaagaagctgaagacagcccaggagacctacatcaagcccatccctcggctgcaagcc
tccaatgcccgcgacgcgctcgccaaacacatctacgccaaagtcttcaactggatcgtg
gaccatgtcaacaaatctctacgcgccactgtcaaacagcactccttcataggagtcctg
gatatctatgggtttgagacgtttgagatcaacagttttgaacagttctgtatcaactat
gctaacgagaaactgcaacagcagtttaacatgcatgtgttcaagctggagcaggaggag
tatttgaaggagcagattccctggactctgatagacttctatgataaccagccatgtatc
aacctcatagaggccaagatgggggtactcgacctgctggatgaagagtgcaagatgcct
aaaggttcagatgactcgtgggcccagaagctgtataacacccatctgaagacctgctct
ctgtttgagaaacctcgcatgtccaacaaagccttcatcatacagcacttcgctgacaag
gtgcagtaccagtgtgatggctttctggagaagaacaaggacacagtgaatgaagagcag
atcaatgtcctgaaggccagcaagttggacctgctagtggagctgtttcaggatgaggag
aaagtgaccagtccaacagggaccgctccaggaggtcgaacacgactcagcgtcaaacca
aaagaggtcagatctggagcaagcagcaaggagcacaagaagactgttggctgccagttc
cggaactctctggctatgttgatggagactctgaatgcaaccactcctcactatgttcgc
tgcatcaagcccaacgacctcaagttccccttcacgtttgaccctaagcgagcggtgcag
cagctcagagcctgtggtgttctggagaccatccgcatctcagccgcaggcttcccatcc
agatggacctaccaggagttcttcagtcgttaccgggttctgatgaggcagaaggacgtc
ctgtcggacaggaggctgacctgtaggaacgtcctggagaaactggtgcaggaccaggac
aagtaccagtttggtaagactaagatcttcttcagggctggtcaggttgcctacctggag
aagctgagggctgataagctgaggaaggcgtgcgtccgtatccagaagaccatccgctgc
tggctggtacgcaagaagtacctccgaaagaagcatgctgccatcaccatccagagatac
acccgcggacaccaggcccgctgtctggttaagtacatgcgtcagaccctggcagccatc
actatccagaagttccagaggatgtgtgtccagaggaaagtgtacctacagaagcaggct
gctgccctggtcatgcagactatcctcagagcgtacatggcccgacagaaataccaaggg
ttgctgcgtaaccacaaagctgtgttcatccagaaacacgtgcgtggctggctggccaga
cagcggtacaagcgctccctgcgagccatcgtctatctgcagtgctgcatcaggaggatg
aaggccaagaaagagctgaagaagctgaaaatcgaggcccgctccgttgaacatttcaag
aaacttaacgttggcatggagaataagatcatgcagctgcagaggaagttagacgaacag
gctaaagacaaccgtgtgactagcgagcggctgaactgtctggagacgtcccacgcggtg
gagagtgagaagctgaaggtagaggtgtctaagctgaaggggatagaagaggaagccaag
aacaacgccaaccgtgtcacttcccttctggagcagctggagaggctgaggagggagctg
accaccacccagaaagagaagaagaccattgaggactgggctaccaagtacagggatgag
atggaaaagatggtagcagagctgaagcagcagaatggtctgctgaagaccgagaaagac
gacctgaaccgaatgatcaaggaacagagccagcagatgacagagaaaatgactcgtgca
ttagcggaggagactcagcagttggagagcgatctgaacgaggagaggtctcgctaccag
aacctcctaacagaacacctgagactggaggaacgctacgacgacctcaaggaagaaatc
actctctctgtgagcgtgcccaagcccggccacaggagaacagactccacccacagcagc
aacggatcagagtgcacctacaactcagagttcgccgagtcagaagaaagttcccgacat
ggagaagatgtgacccggggcatggacacgtctctgactctgaagctgcagaagcgcgta
accgagctggagcaggagaaatcctctctccgcaacgagctagaaaacaaggaggagcag
ttccagcgggctagagtcagggatgatgaggagcataagaaatcacgtggagcagaactg
gagtacgagtctctcaagcgccaggagctggattccgagaacaagaagttgaagcatgac
ctgaccgccatgaggcagagcctgctgggtaatgcaggcgctggggcgggggcaccagga
agtccaccctacaaagttctcatggaccaactgaactcctcgtgcgaggagctggaggtg
cgaaaagaggaggtgctgattctacgatctcaactggtctcacagaaggaggccatgcag
cacaaggatgagaaggagacgatgacagagccagtgcactatgcagaggatgtccataag
atgaaggactctggtgcaatcactcaggcttatctaggactcaaagagaccaacagactg
ttggagggccagatgcagcagcagcggcgtagctatgacaacgaggtggaggtgttgcga
ggggagttacagagtgttaaagaggagaataaccgtcaacaacagctgctggcccagaac
ctgcaactcccaccagaggcacgcatagaggctagtctacagcatgagatcacacgactc
accaacgaaaacctggagatgctgaggactgaggatccaacagcatatcgcagcgccaaa
gtcaacatattacgacggatggttgacctcatggaacagctggagaagcaggataaaact
atccgtaagcttaagaaacagctgaaggtgttctcaaagaagattggagaaatgggagct
ggacatgttgagactatatctccgggtcagatggttgaagagacggtccgtccggtgaac
attcctcgtcgcgagaaagacttccagggaatgttggagtacaagaaggaggatgagctg
aaactggttaagaaccttatactggagttgaagcctcgtggtgtagcggtgaatctgatc
ccaggcctgccagcctacatcctcttcatgtgtctgaggcatgctgactatgtcaacgat
gaccagaaggtcaggacgctgctcacatccaccatcaacagcatcaagaagatactcaag
aaacggggggatgactttgagacggtctccttctggctgtccaacacctgccgcttccta
cactgtctgaaacagtacagcggagatgagtcgtttatgaagcacaacactcctaagcag
aatgatcactgcctgtctaactttgacctggctgagtaccgtcaggtcctcagtgacctg
gccattcagatctaccagcagctcatcaaatgcatggagaacatcctacagcccatgatt
gtctctggtatgttggagcatgagaccatccagggtgtgtcgggggttaagccgaccggt
ctgcgtaaacggacatcgagcatcgctgacgagggaacctacacgctggaatccatctta
cgccagctcagcgctttccactccaccatgtgtcagcacggcaccgaccctgaactcatc
aaacaggttgtgaagcagcagttctacatcattggagctgtgactctcaacaatctactg
ctgcgtaaagacatgtgctcctggagcaaaggcatgcagatcaggtataacgtgagtcag
ctggaggagtggctgcgtgacaagtctctgatgctgtgtggagccaaggagactctggag
cctctgattcaggctgctcagctgctgcaagtcaagaagaagacggacgaagacgccgag
gccatctgctccatgtgcaacagcttgtccacatctcagattgtgaaggtgttgaacctg
tacactccagtcaacgagtttgaagagagggtgtctgttaccttcatacgaaccatacag
actcgtttgcgggaccgctgtgagactcctcagctgttgatggacactaagatcatctac
ccagtcaccttccctttcaacccctcctctctggccctggagactatccaaataccaggc
tccctcaacctagccttccttacccgcgtctaa
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