Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384919
Help
Entry
139384919 CDS
T10872
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
139384919
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ocla01003
]
139384919
Enzymes [BR:
ocla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
139384919
Glycosyltransferases [BR:
ocla01003
]
Unclassified
Sulfotransferases
139384919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
HTH_33
Motif
Other DBs
NCBI-GeneID:
139384919
NCBI-ProteinID:
XP_070985926
LinkDB
All DBs
Position
26:complement(40218974..40224854)
Genome browser
AA seq
425 aa
AA seq
DB search
MQCSWKAVILLALASIAIQYTAIRTLTSKPFQLCPVPSPQNCGLLGGPETESPIEGRAGC
DDYPYFSFNASRKTHIMVLATTRSGSSFVGQLLNQHADIFYLFEPLYHVQTTLIPRLSHS
RNAADRRVMLGASRDLLRSLYGCDLYFLESYIKPAPANHTTDKLFRRGASRALCSLPVCD
AFGPTDTNVEEGDCVKKCASLNMTLAADACREKRHVAIKVVRVPEIGDLRALVEDPRLNI
KVIQLVRDPRGILSSRIETFRDTYRLWRIWRATGRRPYNLDLSQLTVVCEDFLGSVSTGL
SHPHWLKGKYMLVRYEDLSRNPLLKTMEIYDFLGLPMDKSVEEWIQTNTRGSTELSAKHK
YGTVRDSAANAESWRLKLSYDMVEYTQATCHKVLHQLGYKAVKSAEELKNMSLSLVQDKT
YVPFS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgttcctggaaggcagtgatcctgctggccttggcctccatcgccatccagtac
accgccatccggactctcacctccaagcccttccagctttgccccgtgccaagcccccag
aactgtggcctcctgggaggccccgagacagagtcccccatagaggggcgggccggctgc
gacgactacccctacttcagcttcaacgcctcccgtaagacccacatcatggtgctggct
acaacgcgcagcggctcctccttcgtgggccagctgctcaaccagcatgctgacatcttc
tacctattcgagcccctctaccatgtccagaccactctgatccctcggctatctcacagc
cgcaacgcagccgaccgcagggtgatgctgggtgccagtcgcgatctcctgcggagcctc
tacggctgtgacctctacttcctagagagttacattaagccggcgccggccaaccacacc
acggacaagctgttccgtagaggggccagccgggcgctatgctcactgcccgtgtgtgat
gcctttggacccaccgacaccaatgtagaggagggtgactgcgtcaagaagtgtgcctcc
ctcaacatgaccctggcggccgatgcctgccgcgagaagcggcatgtggcgatcaaggtt
gtgcgtgtgccggagatcggggacctgcgggcgctggtggaggatccacggctgaacatc
aaggttatccagttggtgcgcgaccctcgcgggatcctgtcgtcgcggatcgagactttc
cgggacacctaccgtctgtggaggatctggagggccacagggcggaggccctacaacctg
gacctcagccagctgacagtggtttgtgaggacttcctcggctctgtgtccacaggactc
agccacccccactggctcaaagggaagtatatgctggtgcgttacgaggatctgtccagg
aaccctctgctgaagaccatggagatatatgacttcctgggtctgccaatggacaagagc
gtggaggagtggatacagaccaacactaggggcagcaccgagctgtcggctaaacacaag
tacggtacagtgagggactcagcggccaacgccgagagctggcgcttgaaactgtcctac
gacatggtggagtacacgcaggccacgtgtcacaaggttctacatcagctgggctataag
gcagtaaagtcagctgaggaactgaaaaacatgtcgctctcactcgtgcaggacaaaact
tatgtacctttttcctaa
DBGET
integrated database retrieval system
