Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385029
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Entry
139385029 CDS
T10872
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139385029
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GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
DUF4537
RTT107_BRCT_5
BRCT
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
139385029
NCBI-ProteinID:
XP_070986161
LinkDB
All DBs
Position
26:32337182..32380191
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AA seq
1901 aa
AA seq
DB search
MDPSGSDLDSSLPHAENPCLIVEDSQPDSAALEDDPDSSYRALLARRLSSLQPATSHSPV
LELMSSPAGNRYSETDSQSERVQNNNHNGPVNQEESQVLEVCSNTRRCSTEDMATESGAD
STTHCAQPEGGVSKLDFLELSESQGPGEVVGNSQEEEGPTAAQTDSQRHNQPGEQKNTTR
GLPSGSQDRKSKRSEVSSSSSSEPLGRAGRELSVQALLHSQGLQASEDQDPKGEDSELLS
SQEDLFDTDKTGTGVDSTMSEAENQGVPTLTPAHTLRLLHLSGQGTLVQESLSQNSEFVA
PTQENLSQTPFIVPNSPTGQENELGADESMDTSMPPEDQSDGKEEEPMDPAPKSHPSAST
PVSQNSPGFVLERTLSLPTQPELSHDVFVPTQSQEAGSSSIAPQETHSRKVTSSSQPTVL
DSSSPKMAAAPAQSKAPTTTDREHSVTDSFQLELSVNTQSCSLAQQASMQAGGKDVEEDS
QATQIEEGLDGRLRIDTSDSVISRNSQKRESNGVPFDPKTPAILPKVPQVPDLLKTSGES
TRREECSTSQKSDTHKQTTLNVRNVNIGDDGINVTKTDSSQKQDAKASSPSPSSQQKLET
IDLFTPSSCVQETPSSSNSAACSLASLSQSQSQSVFPQMSHVGSVKALSPSPGVCVDSRR
DGGGRRDIGEAGGGGSPTSSQKNRDPSKSIQSLSQERGGTATNSPKEKNKADEEGMEEGG
EKQHDSTLGPEGSGLYLSLSQSQVLSPEPMEEEEEEEKIGKFPVSHSRSEGGVGEEESCS
SIIVLEESERSSQLLEKEVKSPSNMGTSQPVASRRGSVSSNGTGSQLKDTQLVPIGLTQA
DKEGSREAEGLRDKSLSDSSGEIPFHFTLPKEGELIGPPVSATPPLISQLKQTPRHSTPI
DMTSFSEKSAAVGDVSTETAMATSEITAGESGEDTADGADGKLSLRMKLVTPVEEGSSEH
FSLQKPPQSDEEGSVSKVTTVVKAVTSPLPSPSVFSRVREAHRQVMEDQTEAHPSDPGTP
VRGELFSSPSQQKSSQRPSIPSLSLECISLPNSQSEPLSSPRQEVKHTLPLGLREKEPPA
EPSTPGHPAVKTPQKGTAAGDREPCGPPEPSTPTRAAAIRQRAVSQQTSFDNTISPSSPS
KLCQRVAFQQTSFEAAGPRSPAASGELETPPSRAAAGPVHRRHVRTIQEVRTTVTRIITD
VYYEDGREVDCKVTEESEEPVVDSRVLESDISPCRTGSSMTSGDLGDVSSLSSKASSLQH
SSGGTSIVTGPAQRGPEFVMPPSRGAKSVSPRRGSGPQQRGHRGQTAGSEFMGERVQGLH
GSRAFTPLTPRGRARRGRPPSRSPLSRGAGVPRTNARGQPLSSSEDEPYTRLCPTPHIPD
SPAVPSHSSTSLLTTISQDESSPAGSSFVGLRVVAKWSSNGYFYSGRITKDLGEGRYRLL
FDDSYECEVTGKDILLCDPIPLDTEVTALLEDEYFSTGRVKDYKKEGEDLFYSVEKQGQT
TAVEREGQTTAVESEGQTTATTAVESEGQTTATTAVERQWYSRSSVILTMEQGNRLREQY
GLGPYEPSTPLAKASDISLDNLVEGKRRRRGITGGASPLTPGPSGKRKLISSEDRDRTPA
KRGRRGGARAGQRVGVCNTSGSGTDLPWDHSDLAETHGPLPQSASLFVGFVFMLTASSES
DRQTNQPISDGEEEYVQTAPYHKRYTETQLEAGAGFILNDFNEEQCKAAYQSLLITDQHS
RTRKYLLCVASGVPCVSHIWVRDCCKEGKLLNYRNYLLPAGVGPDERIVEWHPRCSPFKA
LRVLLVFEEPAELWSELLMMSGASSVRQHQAEKDSSDIPVGKFDVVVTDRTCPPLVLKSV
TSQEVPMVSPEWLIHSLICGERLGYHSNPQYRHDYTSPPSS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggatcctagcggaagtgacctggattcgagtctgccccatgcagagaacccgtgcttg
atcgtggaggactcccagcccgacagtgcggcactggaggacgacccggacagtagctac
cgcgccttgctcgcccgccgcttgtccagcctgcagcctgccacctcccacagccctgta
ctggagctgatgtcctctccggcaggaaaccgatactccgagacagacagccaatcagag
agggtccagaacaacaatcacaacgggccagtcaaccaggaggaaagtcaagtcctagaa
gtttgctccaatacaaggaggtgttctacagaagacatggccacggagtctggggcggac
tccactacacactgcgcccagcctgaagggggagtgtccaagttagattttctggagctt
tctgagagccagggtccgggtgaagtggtggggaacagtcaggaggaggagggccctact
gctgcccagacagacagccagagacacaaccagccaggtgaacagaagaacacaaccagg
ggcttgccttcaggcagtcaggacagaaaatccaagaggtcggaggtgagctctagcagc
tcgtcggagcccctgggtcgtgccggccgggaactgagtgtccaggctttgctccactcc
cagggcctgcaggcctccgaggaccaggatcccaaaggggaagactctgagctgctgtcc
tctcaggaggacctcttcgacactgacaagacaggcacaggggtggacagcacaatgtca
gaggcagagaaccaaggtgtgcccaccctgacccctgcccacaccctgcgtctgctgcac
ctctctgggcagggcaccctggtgcaggagagcctctcccaaaactctgagtttgtagca
cccacccaggaaaacttgagccaaacacctttcatcgtccccaattcaccgacaggacaa
gaaaatgaactgggtgccgacgaatcaatggacacgtctatgcctccggaggaccaatcg
gatggtaaggaggaggagccaatggacccagctcctaagtcacacccctcagcatccacc
ccagtatcccagaactccccaggttttgtgttggagaggaccctctctctacctacccag
cctgagttatctcatgatgtatttgtcccaacccagagccaagaggctggaagcagtagc
atagctccacaagagacgcacagcaggaaagtgacatcatcatcccaacccacagtcctg
gattcaagctcacccaagatggccgctgcacccgcccagtccaaagcacccacaacaact
gaccgagaacactctgtgactgattctttccaactggagctgtctgtgaatactcagagc
tgtagtctggcccagcaggcttccatgcaggctggggggaaggatgttgaggaggacagt
caggctacacagatagaagaaggtctggacggacgcctacggatagacaccagtgactct
gtgatttcacgtaacagccagaagagggaaagtaacggggtccccttcgacccaaaaaca
cctgctattttgcctaaagttcctcaggtgcctgacttactgaagactagcggggaaagt
accaggagagaggaatgtagcacttcacagaagtctgacacgcacaaacagacaaccttg
aatgtacgcaacgtgaatataggcgacgatggtattaatgtgaccaaaacagatagttct
cagaagcaggatgccaaggcctcttccccctctccttcctcccaacagaagcttgaaacc
atagacttattcacccctagcagctgtgtgcaggagacgccttcttcctcgaatagcgct
gcctgtagtttagcctccctgtctcagtctcaatcccagtctgttttcccacagatgtct
cacgtgggatcagtgaaggctctctctccgagtccaggtgtttgtgtagactccagaaga
gatggaggaggaaggagagacataggagaagcaggaggagggggaagcccgacgagttca
cagaaaaaccgggacccgtctaaatccatacagtctttatcgcaggagcgtggaggcact
gctaccaacagcccaaaggagaaaaacaaagcagatgaagaagggatggaggagggggga
gagaagcagcacgacagcacgttggggcccgagggctcaggcctctatctgtctctctcc
cagagccaggtgctttctccagagcccatggaggaagaagaagaggaggaaaaaataggg
aagttccctgtctcgcactccaggagcgagggaggagtaggagaggaggagagctgcagc
agcatcattgtgctggaggagagtgagaggagctcccagctactggagaaggaagtgaag
tcgccgtctaacatgggcacgtctcagccagtggcaagccggcgggggtcagtgtcgtcc
aatggcacagggtcacagctgaaggacacccagctggtaccaatcggactcacccaggct
gataaggaaggctctagggaagcagaggggctccgagacaagagcctcagtgacagctct
ggagagattccattccacttcactctccccaaagaaggcgagctgattggccctcctgtg
agtgccactccccctctgatcagccagttgaagcagacaccaagacacagcactccgatt
gacatgacgtccttctctgagaagtccgcggcggtgggtgatgtttccacggagacggcg
atggcgaccagcgaaatcacggcgggggagagtggcgaggacacggccgacggggctgat
gggaaactgagtttgcggatgaagctggtgacccctgtggaggagggcagctcagaacac
ttcagcctgcagaagccaccgcaatcagacgaggaaggctctgtctccaaggttaccacc
gttgtcaaggctgtaaccagccccctgcccagcccctctgtgttcagcagggtgagggag
gcccacagacaggtgatggaggaccagaccgaggcccatcccagtgaccctggaacccct
gtcagaggggaactgttcagctcaccctcacagcagaaaagctcccaaagaccctccatc
ccttctctctccctggaatgcatcagcctccccaacagccaatccgagcccctctccagc
ccccgccaggaagtgaagcatacgttgccattggggctcagagagaaagagcctcctgct
gaaccatccaccccaggccatccagcagtgaaaacaccacaaaaaggtaccgcagctggg
gatagagagccgtgtgggcccccggagccatccacccccaccagagccgctgccatcaga
cagagggccgtgtcccagcagacaagctttgacaacaccatctctcccagttcacccagt
aagctttgtcagagagtggcgtttcagcagaccagttttgaagcggctggccccaggtct
ccagcagccagcggcgagctagagaccccaccctcgagggcagctgctggtcccgtccat
cgcagacacgtgcggacaattcaggaagtgcggacgacggtcacacgcatcatcactgac
gtgtactacgaggacgggagagaggtggactgtaaggtcactgaggagtcggaggagccg
gtggtggacagccgtgtgttggaaagcgacatctctccgtgtcgcaccggcagctccatg
acctccggtgacctgggtgatgtcagctctctgtcctccaaagcttccagcctgcagcac
agctccgggggcaccagcatagttacgggtcctgcccagaggggccctgagtttgtcatg
ccgcccagccgaggggccaagtctgtcagccccaggagggggagtgggccacagcagagg
ggccacaggggtcaaacggcagggtcagagttcatgggcgagagagttcaaggactccat
gggtcacgggcattcaccccattgacgccccgcggaagagccaggaggggcagacctccg
tcccgctcacccctgtccaggggtgccggcgtccctcgtaccaatgcccgcggccaacca
ctgtcctcctccgaggatgagccctacacccgcctgtgtcccaccccgcacatcccagac
agcccagcggtccccagccactcctccacgtctctcctcaccaccatttcccaagatgaa
agcagcccagctgggagcagcttcgtggggcttcgcgtggtggccaagtggtccagcaac
ggctacttctactcaggccgcatcaccaaggacctgggcgaggggcgttaccggctgctc
ttcgatgacagctatgagtgcgaggtcacgggcaaggacatcctgctgtgcgaccccatc
cccctggacactgaggtcacggcactgctggaggacgagtacttcagcacaggtcgagtg
aaggactacaagaaggagggcgaggacttgttctacagtgtggagaagcagggccagact
acagctgtagagagggagggccagactacagctgtagagagtgagggccagactacagcc
actacagctgtagagagtgagggccagactacagccactacagctgtagagaggcagtgg
tacagccgcagttctgtcatcctgaccatggagcaaggcaacaggctgagagaacagtac
ggcctgggaccctacgagccctccacaccccttgccaaggcctctgatatcagcctggat
aacctggtggaggggaagaggagacgcagggggatcacagggggggccagccccctcacc
cctggcccctctgggaagaggaagctgatcagctctgaggacagggacaggaccccggct
aagcgaggccgcagagggggagccagagccggtcagcgggttggtgtgtgtaacacctca
ggcagtggcaccgacctgccctgggaccatagtgacctggcggagactcacggcccgctg
ccccagagtgcatctctcttcgtgggctttgtcttcatgctgaccgcatcatcagagagc
gaccgccagaccaaccagccaatcagcgatggcgaggaggagtatgtgcagacggccccc
tatcacaaacgctacactgagacacagctggaggccggagcaggcttcatcctcaacgac
ttcaacgaggaacagtgcaaggcggcctatcagagcctgctgatcaccgaccagcatagc
cgaaccaggaagtacctgctgtgtgtggccagtggtgtgccgtgtgtgtctcacatctgg
gtgagggactgttgcaaggagggcaagctgctcaactacaggaactacctgctgcccgcc
ggagtgggccctgacgagcgcatagtggaatggcatccgcgctgcagcccgtttaaggcc
ctgcgggtcctgttggtatttgaggagccggcggagctgtggtctgagctgctgatgatg
agtggagcttcctctgtgagacagcatcaagcagaaaaggacagctctgacattcctgtg
ggcaagtttgatgtggtggtcacagaccgcacctgtccgccattggttctgaagagtgtg
acatcacaggaagtacccatggtgtcgcccgagtggctaatccacagtctgatctgtggg
gagcgcctgggataccatagcaacccccaatatcgtcatgactacacatccccaccctca
tcctaa
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