Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385035
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Entry
139385035 CDS
T10872
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139385035
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
139385035
NCBI-ProteinID:
XP_070986173
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Position
26:complement(18019997..18030943)
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AA seq
809 aa
AA seq
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MKPGHERNQECLPPKKRDLNNSTSSSSAGGGAGSGVGGGGGGEVATQSSGVSSDTQGGGT
AEEWLRAQPGLHYGVESAEGLQGLPVDQYSMLYRVALPSVSYSQTSLHPVLSHISPAYTV
PSSLLQHHPGISYPPLGYAQIPHSSFQFVSPYGAVPYAVPPGFVPSSLISPSGTLSQPHL
VPYQSVIQEGVVSPPTQTHVSAHAFAKVGSSGGVPLMLTSEQAAQHQQHLGALPAAELSP
RGVPVFYHSRGTRAAPAPWDPYSGEQETDGDREVNGGEREQAAREMLQDSVYNARNPRLP
QAASASVALEHAQDRSLKSRRLDERASPGQRSTPDTDLEVQQVVGRLASPVQGVSGGRKE
VSFGPLNLSQGSQRGREAHGEAGESAGRTGYAIHPAVYGDPRVMAHQQQAGQPGHAVILA
NGQTVLVPLDYHHHHLPHQHQQPPQHYPSQTNDDTSAVTMASPTPYSKASESPARVCLPD
RAVVELAAVEQHPQQPFSVPATAALTQAPAPTPAPSNPSHFMKGAIIQLATGELKRVEDL
QTQDFVRSAEVSGGLKIDSSMVVDIRTSQQRPGLVVLHFTVGEQQSKVTIDVPPEHPFFV
FGQGWSSCSPERTAQLYGLACHHLQVGDVCVSITLQQPPQQQKQLLQQQQQQQQQQQQTQ
ARTSTKANSTSGAIGQPMGPPAPQQPRPQPHFRMERVHRERERGDKEEPMQLGGVGQSEM
PTRPNRTSAEHTRSQSSYYLHTEGSVRPGAGVGVVSTVSSASQRRWSAPGLQRCMKVEEG
AHPQLGSSRPSFIPQEVKLSIEGRSNAGK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaggtcacgagcgcaatcaggagtgcctgcctcccaagaagagggatctcaac
aacagcaccagtagtagtagtgcgggaggaggggcaggaagtggggtggggggaggaggg
gggggggaagtggccactcagagctcaggggtcagtagtgacactcagggaggaggcaca
gcagaagagtggctgcgtgcccagcctggtctacactatggagtagagagtgctgagggc
ctccaagggctgcccgttgaccagtacagcatgctctatagggtggctctcccctctgtc
tcctactcccagaccagtctacacccagtgttaagccatatctcaccagcttacactgtc
ccctcatctctcctacagcatcatccagggatctcctatccccctctaggctatgcccag
atcccccactcctctttccagtttgtctccccatacggtgcagtcccttatgcagtcccc
cctggctttgtccccagctccctgatctctccctcgggcaccctctcccagccccacctg
gtcccctaccagtcagtcatccaggagggggtggtctcccctcctacccagacacatgta
tctgcccatgcctttgccaaagtggggtcgtccggaggtgtcccgctgatgctgacctcg
gagcaggctgcccagcaccagcagcacctgggtgcgctgcccgccgcagagctcagtcct
cggggagtgcctgtcttttaccactctcggggaaccagggctgcacctgccccctgggac
ccctacagtggggagcaggagacagacggggatagggaggtgaatggaggggagagggag
caggcagccagggagatgctccaggactctgtctacaatgccaggaatccacggctgccg
caggcagcatctgcctctgtagcactggagcacgcacaggacagaagcctgaagagccgc
aggctggacgagagggcttcgcctgggcagcgcagcaccccagacactgacctggaggtt
cagcaggtcgttggtcgcctagcctctcctgtccaaggtgtgagtggaggccgcaaagag
gtgtcctttggtcccctgaacctatcccagggctctcagagaggcagagaggctcatggg
gaggcaggggagagtgctggccggacagggtacgcgatccaccctgcggtgtatggagac
ccccgagtgatggcccatcaacagcaggcagggcagccaggccacgctgtcatcttggcc
aatggacagacagtcctggtccccttagactatcaccaccaccacctcccccaccaacat
caacagccaccccagcactaccccagccaaaccaatgatgacacctctgctgtcaccatg
gcctcccccaccccctactctaaagcctctgaatctccagccagagtgtgcctcccagac
agggctgtggtggagctggccgccgtggagcagcacccccagcagcctttttctgtccca
gccacggcagccctcacgcaggccccggcgcccacccctgccccctccaatccctcccat
ttcatgaagggggccatcatccagctggccacgggggagctgaagcgtgtggaggacctg
cagactcaggactttgtgcggagtgctgaggtgagcggggggctgaagatcgactccagc
atggtggtggacatcaggaccagccagcagagacccggtctggtggtgctgcacttcaca
gttggcgagcagcagagcaaggtgaccatcgacgtgcccccggagcaccccttctttgtg
tttggccagggctggtcctcctgtagcccagagcgcacggcccagctctatggcctggcc
tgccaccacctgcaggtaggagacgtgtgtgtgtccatcactctgcagcagccgccccag
caacagaaacagctcctgcagcagcagcaacaacaacaacagcaacagcagcagacccaa
gccaggacttccaccaaagccaactccacatcaggggccatcggccagcccatggggccc
cctgccccccagcagcccaggccacagcctcacttcaggatggaacgcgtccacagagag
agggagaggggggataaagaggagcccatgcaactagggggtgttgggcagagtgagatg
cctaccagaccaaataggacttcagcagagcacactaggagccagagcagttactatttg
cacacggagggttctgttcgtccaggggcgggggtgggagtggtgtcgacagtgtcgagc
gcgtctcagaggcgctggtccgcccccggccttcagagatgcatgaaggtggaggaaggg
gcgcaccctcagctgggctcctctcgaccctccttcatcccacaggaggtcaaactgtcc
attgaggggcgctctaacgctgggaagtag
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