Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385042
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Entry
139385042 CDS
T10872
Name
(RefSeq) synaptic vesicle glycoprotein 2B-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139385042
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139385042
Transporters [BR:
ocla02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
139385042
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GFIT
Motif
Pfam:
LD_SV2
Sugar_tr
MFS_1
Pentapeptide_3
Pentapeptide_4
MFS_2
EF_assoc_2
Motif
Other DBs
NCBI-GeneID:
139385042
NCBI-ProteinID:
XP_070986181
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All DBs
Position
26:43761250..43825991
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AA seq
694 aa
AA seq
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MDDHWQNNVNQQGTEIPTYGEGGGQEYPYQADFPQQEGGGDEDARSDATEGHDEDAEAMY
EGEYQGIPHPDEIKAAQRAARAEARKKARLAAAMPDEEDLAEQYENIMEDCGHGRFQWTL
FIVLGMALMADGVDGFVVGFVLPSAEKDMCISNANKGMLGLLVYVSMMVGAFVWGSLADK
MGRRKCLIYCLAIDCVFSFLSCFAQGYGFFLFFRFCSGFGIGGTVPIVYTYFAEFLQMDK
RGEHLSWLCMFWMFGGLYASFTAWGIIPHYGWGISLGTQYQIHTWRVFILVCMFPAIIAL
VGLVFMPESPRFFLENGRHDEAWMILRQVHDTNWKAKGEPERVFTVSNITTPKTQEDEFI
EIQSDTGTSFQRWTVRHTNLLKQVMQNVMSLAAPDLRLQGLFLAIVWFTMAFSYHGLSVW
FPDMIKYMQYEEYESKVKLFHRERVERFHFNFSLVNQIHKEGEYVHDKFMDIEIKSVKFE
DSLFENCYFEDVRSTNTYFENCTIKNTVFYNTDLWEDSKFIDCRMENATFLHPKKGCHLN
FQEENDIVIYMVSFLGSLATLPGNILSALFMDKIGRIKIIGGSMLISAVCTFLLLLSFSQ
GAVILFQCLFYATSVAAWNGLEVITVEIYPSAKRCTAFGVLNGTCKLAAIIGSVIFAKFI
GITKIIPIFLAFAALACGGLLATKLPDTREKILE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccattggcagaacaatgtgaaccagcagggcactgagatccccacctacggg
gagggaggcggccaggagtacccctaccaggctgacttcccccagcaggagggtgggggg
gacgaggatgctaggagtgatgccacggaaggtcacgatgaggatgcagaggcgatgtac
gaaggagagtaccaggggatcccccaccctgacgagatcaaggcggcccagcgggcggcc
agggccgaggccaggaagaaggccaggctggcagcagcgatgccggatgaggaggacctg
gcagaacagtatgagaacatcatggaggactgtgggcacggtcgtttccagtggaccctg
tttatcgtgctgggcatggcgctgatggcggatggcgtggacggatttgtggtgggcttc
gtgttgcccagcgccgagaaggacatgtgcatatccaacgccaacaagggcatgctgggt
ctgttggtgtacgtgtcgatgatggtgggggctttcgtgtggggcagcctggcggataag
atgggccgtaggaaatgtctgatctactgtctggccatcgactgtgtcttcagcttcctg
tcctgcttcgctcagggatacggattcttcctcttcttcaggttctgctccggcttcggg
atcggagggactgtccccatcgtgtacacctacttcgcagagttcctccagatggataag
agaggggagcaccttagctggctgtgtatgttctggatgttcggtgggctctacgcctcc
tttaccgcctggggaatcatccctcactacggctggggcatcagcctggggacacagtat
cagatccacacctggagagtattcattctggtgtgtatgtttccagccatcattgccctc
gttggactggtcttcatgccagagagtccacgcttcttcctggagaatgggagacatgac
gaggcctggatgattctgagacaggtccatgataccaactggaaggccaagggagaacct
gagagggtattcactgtgtccaacatcacgactcctaagacgcaggaggatgagttcatt
gagatccagagtgacactggaacatccttccagcgctggactgtcagacacaccaacctc
ctcaaacaggtgatgcagaacgtgatgtccctggcagcaccagacctcagactgcagggt
ctgttcctggctatcgtctggttcaccatggccttcagctaccacggactgtcggtgtgg
ttccctgacatgatcaagtacatgcagtatgaggagtacgagtccaaggtgaaactcttc
catcgagaacgagtggagagattccacttcaacttctccctggtcaaccagatccacaaa
gagggagaatatgtccatgacaagttcatggatatagagatcaagtctgtgaagtttgaa
gattccctgtttgagaactgttactttgaggacgtcaggtcgaccaacacgtactttgag
aactgcaccatcaagaacacggtcttctataacacagacctttgggaagactctaagttt
atagactgtcggatggaaaatgccacgtttctccatccgaagaaaggctgccatctgaac
ttccaggaggagaacgacatcgtcatctacatggtcagcttcctggggagtctagcgaca
ctgccaggcaacatcctgtcagccctcttcatggacaagataggaaggatcaaaattata
ggtggttctatgctgatatcagcagtttgtacgttcctcctgctcctcagcttcagtcag
ggggcagttatattatttcagtgccttttctacgctaccagcgtcgcggcctggaacgga
ctggaggtcatcacagtagaaatctacccttctgctaaaagatgcacagcgttcggagtg
ctgaacggtacctgtaagctggcagccattattggcagcgtcatctttgccaagttcatc
ggcatcacaaagatcatccccattttcctggcgttcgcagcgctcgcctgtggaggtctg
ctggccaccaaactgcccgacacacgggagaagatcctggagtga
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