Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385058
Help
Entry
139385058 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139385058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139385058
NCBI-ProteinID:
XP_070986202
LinkDB
All DBs
Position
26:complement(27756688..27760088)
Genome browser
AA seq
458 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHDEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRGEHFHHHHNSFEMKASQPNVEQLKLNPVSI
NSPPSENNAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLISCP
VGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHTQDKSHSSDTAVTER
SSALEAEKKLLKTAFHPVHRRPQNQLEAAMVLSALASS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccgcagctgggataccagtacatccgaccgatatacccaccggagcgacag
ggtatcagcaatgcccgagccgggacggagttgagcccgtccggggcactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtacaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagt
acactgaaggcctggctaagcgagcatcgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaat
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgatgagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagatggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagtg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccaccataactct
tttgaaatgaaagcttcacaaccgaatgtcgaacaacttaaactgaatccggtgtccatc
aactcgcccccatcagaaaataacgcagccccggcccaaaagccaaagatttggtctttg
gcggagacagcaacaactcctgacaatccccgcaaatctccacaaatgaatggcagcaac
acagttgggcccgccgcccagaccataatcagccctcatcacagactcatctcttgtcct
gttgggaaaatccagaactggacaaaccgagctttttctgcccaccagctcgcattactg
aactctaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctctac
agcaggcagcaacacacgcaggacaagagtcatagctcagacacagccgtcacagagaga
tctagtgccttggaagcagagaaaaagttgttaaaaacagcctttcacccagttcataga
cggcctcagaatcaactcgaagcagccatggttctgtcagctctcgcctcctcctag
DBGET
integrated database retrieval system
